ggKbase home page

scnpilot_solids1_trim150_scaffold_581_curated_5

Organism: solids_Xanthomonadales_2

partial RP 17 / 55 MC: 2 BSCG 18 / 51 MC: 2 ASCG 7 / 38
Location: 4659..6041

Top 3 Functional Annotations

Value Algorithm Source
dbpA; ATP-dependent RNA helicase DbpA; K05591 ATP-independent RNA helicase DbpA [EC:3.6.4.13] similarity KEGG
DB: KEGG
  • Identity: 68.8
  • Coverage: 455.0
  • Bit_score: 613
  • Evalue 6.00e-173
RNA helicase n=1 Tax=Xanthomonas axonopodis RepID=UPI0002D8832F similarity UNIREF
DB: UNIREF100
  • Identity: 68.6
  • Coverage: 455.0
  • Bit_score: 613
  • Evalue 1.50e-172
RNA helicase {ECO:0000313|EMBL:EYR67091.1}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici AZ78.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 73.0
  • Coverage: 456.0
  • Bit_score: 661
  • Evalue 1.10e-186

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Lysobacter capsici → Lysobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1383
ATGACCACGCCCGCTACCTTCGCCGACCTCGCCCTTGCGCCCTCCCTGCGCGCCGGCCTCGACGCACTCGACTACACCGCTCTCACGCCCATCCAGGCGCAGGCGTTGCCCGCCATGCTCGAAGGCCGCGATCTGGTCGCGCAGGCGCCCACCGGCAGCGGCAAGACCGCCGCGTTCGGACTGGGCCTCCTGCAACGGATCGACCCCGCGGCCGGCGGCACGCAGGCGCTGGTGCTCTGCCCCACCCGCGAGCTGGCCGACCAGGTGGGCAAGCAACTGCGCAAACTGGCCACCGGCATCGCCAACCTCAAGCTGTCGGTGCTGTGCGGCGGCATCCCGCTTGCGCCGCAGCTGGCGTCGCTGGCGCATGCCCCGCAGGTGGTGGTGGGCACGCCCGGACGGGTGCTGGAACTGGTGCAGAAGGACGCGCTGGACCTGCGCGGAGTGCGCGTGCTGGTGCTGGACGAGGCCGACCGCATGCTGGACATGGGATTCGACGAACCGATCCGCGCGCTGGTCAAGCGCACCCCGAAAACGCGGCAAAGCCTGCTGTTCTCAGCCACCTACCCCGACGCCATCCGCACGCTGGCCACCGCGATGCTGCGCGAGCCGCTGGAAGTCAGCGTCGACGGCGGCGCCCAGCCAGCCACCATCGAAACGCATTTCTTCGAGGCCGAACCCGCCCGCCGCGCGCCGCAGCTGGCCGCGCTGCTGCTGCAGTTCAACCCGGAATCCACCGTGGTGTTCTGCAATATGCGCAAGGACACCGAGGAAGTGGTGGGCTCGCTGGCGCACTACGGCTTCACCGCGCTGGCGCTGCACGGCGACATGGAGCAGCGCGACCGCGAGGAGGTGCTGGTGCGCTTTTCCAACCGCAGCTGCAACGTGCTGGTGGCCAGCGACGTGGCCGCGCGCGGGCTGGACATCGACGACATCGGCGCGGTGGTGAACTTCGAACTGCCCACCGACGCCGACACCTACCTGCACCGCATCGGCCGCACCGGCCGCGCCGGCCGCGATGGGCTGGCACTGAGCCTGGTTGCGCCGGGCGAGCGCAACCGCGTCGCGCTGATCGAGGAACGCCAGGGAAACCCGATCCGCTTCGAACGCATCGTCGCGCTGGAAGGCAAGCCGCGCGGCGTGCCGCAGGCGGCGATGGCGACGCTGCGCATCGACGCCGGCCGCACCGACAAGCTGCGCCCCGGCGACATCGTCGGCGCGCTCACCGGCGAAGCCGGGCTGGCCAAGGAGGCCATCGGCAAGATCGACGTCTATCCCACCCGCAGCTACGTGGCGATCGCCCGCGGCCAGGCCGACCGCGCGCTGGAGCGCCTGCGCGCCGGCAAGATCAAGGGCCGGCGCTTCCGCATCCACCGGCTGTAG
PROTEIN sequence
Length: 461
MTTPATFADLALAPSLRAGLDALDYTALTPIQAQALPAMLEGRDLVAQAPTGSGKTAAFGLGLLQRIDPAAGGTQALVLCPTRELADQVGKQLRKLATGIANLKLSVLCGGIPLAPQLASLAHAPQVVVGTPGRVLELVQKDALDLRGVRVLVLDEADRMLDMGFDEPIRALVKRTPKTRQSLLFSATYPDAIRTLATAMLREPLEVSVDGGAQPATIETHFFEAEPARRAPQLAALLLQFNPESTVVFCNMRKDTEEVVGSLAHYGFTALALHGDMEQRDREEVLVRFSNRSCNVLVASDVAARGLDIDDIGAVVNFELPTDADTYLHRIGRTGRAGRDGLALSLVAPGERNRVALIEERQGNPIRFERIVALEGKPRGVPQAAMATLRIDAGRTDKLRPGDIVGALTGEAGLAKEAIGKIDVYPTRSYVAIARGQADRALERLRAGKIKGRRFRIHRL*