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scnpilot_solids1_trim150_scaffold_6421_curated_2

Organism: solids_Xanthomonadales_2

partial RP 17 / 55 MC: 2 BSCG 18 / 51 MC: 2 ASCG 7 / 38
Location: 540..1538

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059, ECO:0000313|EMBL:KIJ72376.1}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059, ECO:0000313|EMBL:KIJ72376.1};; RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Transcriptase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; TaxID=1245935 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Tolypothrix.;" source="Tolypothrix campylonemoides VB511288.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 91.3
  • Coverage: 332.0
  • Bit_score: 604
  • Evalue 1.20e-169
rpoA; DNA-directed RNA polymerase subunit alpha; K03040 DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] similarity KEGG
DB: KEGG
  • Identity: 90.4
  • Coverage: 332.0
  • Bit_score: 595
  • Evalue 9.30e-168
DNA-directed RNA polymerase subunit alpha n=1 Tax=Xanthomonas RepID=UPI000262A558 similarity UNIREF
DB: UNIREF100
  • Identity: 91.0
  • Coverage: 332.0
  • Bit_score: 596
  • Evalue 1.30e-167

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Taxonomy

Tolypothrix campylonemoides → Tolypothrix → Nostocales → Cyanobacteria → Bacteria

Sequences

DNA sequence
Length: 999
ATGACGGTTACCGCCACCCAAGTCCTGCGTCCGCGCGGACCGCAGATCGAGCGCATCACCGACAACCGCGCCAAGGTCGTGATCGAGCCGCTGGAGCGCGGCTACGGCCACACCCTCGGCAATGCGTTGCGTCGCGTGCTGCTGTCCTCGATCCCCGGCTTCGCGATCACCGAAGTCGAGATCGATGGCGTGCTGCATGAGTACACCACGGTCGAAGGCCTGCAGGAGGACGTGCTCGAAGTCCTGTTGAACCTCAAGGACGTCGCCATCCGCATGCACAGCGGCGACACCGACACCCTGGAACTGAAGAAGCAGGGCCCGGGCGTCGTCACCGCCGGCGACATCAAGACCAGCCATAACGTCGAGGTGCTGAACCCCGACCACGTGGTCGCCAACCTGACCAAGGACGTGGCGCTGAACATGCGCCTCACCATCAGCCGCGGTTTCGGCTACCAGCCGGCTGCCGCGCGCCGTCGTCCGGACGAGGAAACCCGCACGATCGGCCGGCTGATGCTGGACGCGTCGTTCTCGCCGGTCCGTCGCGTCGCCTACGCGGTGGAAGCCGCGCGCGTCGAGCAGCGCACCGACCTGGACAAGCTGGTGCTGGACATCGAGACCAACGGCACCATCGATGCCGAGGAAGCCGTCCGGACCGCCGCCGACATCCTCACCGACCAGCTGTCGGTGTTCGGTGATTTCACCCACCGCGACCGCGGCGCCAAGCCGCAGGCCAGCACCGGCGTCGACCCGCTGCTGCTGCGTCCGATCGACGACCTCGAGCTGACCGTGCGTTCGGCCAACTGCCTCAAGGCCGAGAGCATCTACTACATCGGCGACCTGATCCAGAAGACCGAAGTGGAGCTGCTCAAGACCCCCAACCTCGGCAAGAAGTCGCTCACCGAGATCAAGGAAGTGCTGGCCCAGAAGGGCCTGTCGCTGGGCATGAAGCTGGAGAACTGGCCGCCGGCCGGGGTCGCTGCCCACGGCATGATGGGCTAA
PROTEIN sequence
Length: 333
MTVTATQVLRPRGPQIERITDNRAKVVIEPLERGYGHTLGNALRRVLLSSIPGFAITEVEIDGVLHEYTTVEGLQEDVLEVLLNLKDVAIRMHSGDTDTLELKKQGPGVVTAGDIKTSHNVEVLNPDHVVANLTKDVALNMRLTISRGFGYQPAAARRRPDEETRTIGRLMLDASFSPVRRVAYAVEAARVEQRTDLDKLVLDIETNGTIDAEEAVRTAADILTDQLSVFGDFTHRDRGAKPQASTGVDPLLLRPIDDLELTVRSANCLKAESIYYIGDLIQKTEVELLKTPNLGKKSLTEIKEVLAQKGLSLGMKLENWPPAGVAAHGMMG*