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scnpilot_solids1_trim150_scaffold_1808_curated_8

Organism: solids_Xanthomonadales_2

partial RP 17 / 55 MC: 2 BSCG 18 / 51 MC: 2 ASCG 7 / 38
Location: comp(5670..5972)

Top 3 Functional Annotations

Value Algorithm Source
Integration host factor subunit alpha n=11 Tax=Stenotrophomonas RepID=IHFA_STRM5 similarity UNIREF
DB: UNIREF100
  • Identity: 91.8
  • Coverage: 97.0
  • Bit_score: 181
  • Evalue 3.10e-43
Integration host factor subunit alpha {ECO:0000256|HAMAP-Rule:MF_00380, ECO:0000256|RuleBase:RU004485}; Short=IHF-alpha {ECO:0000256|HAMAP-Rule:MF_00380};; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daejeonensis GH1-9.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.0
  • Coverage: 100.0
  • Bit_score: 188
  • Evalue 6.10e-45
ihfA; integration host factor subunit alpha; K04764 integration host factor subunit alpha similarity KEGG
DB: KEGG
  • Identity: 91.8
  • Coverage: 97.0
  • Bit_score: 181
  • Evalue 9.80e-44

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Taxonomy

Lysobacter daejeonensis → Lysobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 303
ATGGCGTTGACCAAGGCGGAAATGGCCGAGAAGCTGTACGAGGAAGTCGGTCTCAACAAGCGTGAGGCCAAGGAATTCGTGGATGCGTTCTTCGACGCGTTGCGCGAGGCGCTGGAGCAGGGGCGGCAGATCAAGTTGTCCGGCTTCGGCAATTTCGACCTGCGCCGCAAGAATCCGCGCCCCGGCCGCAATCCCAAGACCGGCGAGGAGATCCCGATTTCCGCCCGCACCGTGGTCACCTTCCGTCCCGGCCAGAAGCTGAAGGAACGCGTGGAAGCGTTTGTTGGTGGCGTCCATGCTTGA
PROTEIN sequence
Length: 101
MALTKAEMAEKLYEEVGLNKREAKEFVDAFFDALREALEQGRQIKLSGFGNFDLRRKNPRPGRNPKTGEEIPISARTVVTFRPGQKLKERVEAFVGGVHA*