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scnpilot_solids1_trim150_scaffold_2748_curated_3

Organism: solids_Xanthomonadales_2

partial RP 17 / 55 MC: 2 BSCG 18 / 51 MC: 2 ASCG 7 / 38
Location: 1019..2830

Top 3 Functional Annotations

Value Algorithm Source
ATP-dependent RNA helicase DeaD {ECO:0000256|HAMAP-Rule:MF_00964}; EC=3.6.4.13 {ECO:0000256|HAMAP-Rule:MF_00964};; Cold-shock DEAD box protein A {ECO:0000256|HAMAP-Rule:MF_00964}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensis DS-58.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 71.8
  • Coverage: 588.0
  • Bit_score: 810
  • Evalue 2.00e-231
DNA/RNA helicase, superfamily II (EC:5.99.1.-) similarity KEGG
DB: KEGG
  • Identity: 67.4
  • Coverage: 619.0
  • Bit_score: 785
  • Evalue 1.20e-224
RNA helicase n=1 Tax=Dyella japonica RepID=UPI00031DF4BE similarity UNIREF
DB: UNIREF100
  • Identity: 66.6
  • Coverage: 631.0
  • Bit_score: 786
  • Evalue 2.20e-224

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Taxonomy

Lysobacter dokdonensis → Lysobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1812
ATGAGCGCCGACAACGCGACCCTGCTGTTCACCGACCTCGGCCTGCCCGAGACCCTGCTGGCCGCCCTGCGCGACGTCGGCTATGAGTCACCCTCCCCGATCCAGGCCGCGACCATCCCGCCGCTGCTGGAAGGCCGCGACGTGCTGGGCCAGGCCCAGACCGGCACCGGCAAGACCGCCGCGTTCGCCCTGCCCGCGCTGTCGCGGCTCGACGCCCCAGCCGGCAAGCCACAGGTGCTGGTGCTGGCCCCGACCCGCGAGCTGGCGATCCAGGTGGCGGAGGCGTTCCAGACTTATGCCAAGCACATCCCCGGCTTCCAGATCCTGCCGATCTACGGCGGCCAGGGCTACGGCCCGCAGCTGCATGCGCTCAAGCGCGGCGTGCACGTGGTGGTCGGCACCCCCGGCCGCGTCATCGACCACCTGGAGCGCGGCACGCTGGACCTGTCCTCGCTGCGCATGCTGGTGCTGGACGAGGCCGACGAAATGCTGCGGATGGGCTTCATCGACGACGTCGAAGCCATCCTCAAGAAGACGCCCGAGACCCGCCAGGTGGCGCTGTTCTCCGCCACCATGCCGGCGCCGATCAAGCGGATCGCCCAGACCTACCTGAAGGACCCGGTGGAAATCGCCATCAAGGCGCAGACCACCACCGCCGCCAGCATCCGCCAGCGCTACTGGATGGTCAGCGGCGTCAACAAGCTGGACGCGCTGACCCGGATCATGGAAGCCGAGCCGTTCGACGCGATGATCATCTTCGCGCGCACCAAACTGGGTACCGACGAGCTGGCCGAAAAGCTGGCGGCGCGCGGCTTCAGCGCCGCGGCGATCAATGGCGACGTGGAACAGAAAACCCGCGAGCGCACCATCCAGCGCCTGAAGGAAGGCCAGATCGACGTGCTGGTGGCCACCGACGTGGCCGCGCGCGGGTTGGACGTGGAGCGGATCAGCCACGTGCTGAACTACGACATCCCCTACGACACCGAGAGCTACGTCCACCGCATCGGCCGCACCGGCCGCGCCGGCCGCAGCGGCGAGGCGATCCTGTTCGTGGCGCCGCGTGAGCGCGGCATGCTGGGCGCGATCGAGCGCGCCACCCGGCAGAAGATCGAGCAGATGAACCTGCCCAGCGTGGACGCGGTGAACGAGCGCCGCGTGGCGAAGTTCCTCGACAAGATCGACGCTGCGTTGGGCAGTGACGACCTGTCGGTGTTCCGCGGTCTGGTGGAGCGCTACGAGCAGGAAAAGAACGTGCCGGCGGTGGAGATCGCCGCGGCGCTGGCCAAGCTGGTGCAGGGCAAGACGCCGTTGTTGTTGCCCAAGCCGGCCGTGCCGGAAAAACCCTTCACCGCGGGCGAAGGCCGCCCGCAGCGGAGCGAGCGCCCCGCGCGCGAGCCGCGTGAACGCACCCCGCGCGAGCCGCTGCCGGCCGATGTGGGCATGCGCACGTACCGTATCGAAGTGGGCTACCAGCACGGCGCGCAGCCGGGGCATATCGTCGGCGCGATCGCCAACGAGGCGGACCTGGAATCGCGCTACATCGGCCGCATCGACATCCGCGATGATTACACCCTGGTCGATCTGCCCGAGGGGATGCCGCCGGAGCTGCTGGAACACCTGCAGCAGGTGCGGGTGGCGAGCAAGCCGCTGCGGATGAAGCCGGCCAGCGACGCCGATATCGACGCACCGAAGCGCAAGCGCAGCTTCGGTCCGCCGCGCGACGGCGACCGCCCCGGTGGTCCGCGCAAACCCGGCGGGTTCAAGCCCGGCGGACGCAAACCGGGCGGATTCAAGCCGCGCGGGCCGCGCTGA
PROTEIN sequence
Length: 604
MSADNATLLFTDLGLPETLLAALRDVGYESPSPIQAATIPPLLEGRDVLGQAQTGTGKTAAFALPALSRLDAPAGKPQVLVLAPTRELAIQVAEAFQTYAKHIPGFQILPIYGGQGYGPQLHALKRGVHVVVGTPGRVIDHLERGTLDLSSLRMLVLDEADEMLRMGFIDDVEAILKKTPETRQVALFSATMPAPIKRIAQTYLKDPVEIAIKAQTTTAASIRQRYWMVSGVNKLDALTRIMEAEPFDAMIIFARTKLGTDELAEKLAARGFSAAAINGDVEQKTRERTIQRLKEGQIDVLVATDVAARGLDVERISHVLNYDIPYDTESYVHRIGRTGRAGRSGEAILFVAPRERGMLGAIERATRQKIEQMNLPSVDAVNERRVAKFLDKIDAALGSDDLSVFRGLVERYEQEKNVPAVEIAAALAKLVQGKTPLLLPKPAVPEKPFTAGEGRPQRSERPAREPRERTPREPLPADVGMRTYRIEVGYQHGAQPGHIVGAIANEADLESRYIGRIDIRDDYTLVDLPEGMPPELLEHLQQVRVASKPLRMKPASDADIDAPKRKRSFGPPRDGDRPGGPRKPGGFKPGGRKPGGFKPRGPR*