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scnpilot_solids1_trim150_scaffold_1721_curated_2

Organism: solids_Xanthomonadales_2

partial RP 17 / 55 MC: 2 BSCG 18 / 51 MC: 2 ASCG 7 / 38
Location: comp(101..580)

Top 3 Functional Annotations

Value Algorithm Source
Transcription elongation factor GreA n=1 Tax=Xanthomonas hortorum pv. carotae str. M081 RepID=V7ZDC1_9XANT similarity UNIREF
DB: UNIREF100
  • Identity: 80.6
  • Coverage: 155.0
  • Bit_score: 252
  • Evalue 3.00e-64
Transcription elongation factor GreA {ECO:0000256|HAMAP-Rule:MF_00105, ECO:0000256|SAAS:SAAS00018706}; Transcript cleavage factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daejeonensis GH1-9.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 89.8
  • Coverage: 157.0
  • Bit_score: 270
  • Evalue 1.90e-69
greA; transcription elongation factor GreA similarity KEGG
DB: KEGG
  • Identity: 80.6
  • Coverage: 155.0
  • Bit_score: 250
  • Evalue 2.70e-64

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Taxonomy

Lysobacter daejeonensis → Lysobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 480
ATGAGCCGTGCACCCATCACCGCCAAGGGCGCGCAGCGCCTGCGCGCGGAACTGGAAGAACTGAAGTCGGTCAAGCGTCCCGCGGTGATCGAGGCGATCGCCGAGGCCCGCGCCCATGGCGATCTCAAGGAGAACGCCGAGTACCATGCCGCGCGCGAGCAGCAGGGCTTCATCGAAGGCCGCATCAAACAGCTGGAGGCGGAGCTGTCGCACGCCCAGGTCATCGACGTTTCGAAGCTGGATGCCGGCGACAAGGTGGTGTTCGGCGCGACCGTGGTCGTGGTGGATTGCGATACCGACGAGGAGAAGACCTACCAGATCGTCGGCGACCTCGAGGCCGACATCAAGCAGGGGCTGATCGCGATTTCCTCGCCGGTGGCGCGCGCGCTGATCGGCAAGAACGAGGGCGACGCCATCACCATCGAAGCGCCGGGCGGCACCCGCGAGTACGAGATCGTTTCGGTCGCCTACAAGGGCTGA
PROTEIN sequence
Length: 160
MSRAPITAKGAQRLRAELEELKSVKRPAVIEAIAEARAHGDLKENAEYHAAREQQGFIEGRIKQLEAELSHAQVIDVSKLDAGDKVVFGATVVVVDCDTDEEKTYQIVGDLEADIKQGLIAISSPVARALIGKNEGDAITIEAPGGTREYEIVSVAYKG*