ggKbase home page

scnpilot_solids1_trim150_scaffold_1064_curated_2

Organism: solids_Xanthomonadales_2

partial RP 17 / 55 MC: 2 BSCG 18 / 51 MC: 2 ASCG 7 / 38
Location: 972..3773

Top 3 Functional Annotations

Value Algorithm Source
TonB-dependent receptor n=1 Tax=Xanthomonas sacchari RepID=UPI000262A7A8 similarity UNIREF
DB: UNIREF100
  • Identity: 54.3
  • Coverage: 923.0
  • Bit_score: 1015
  • Evalue 2.60e-293
TonB-dependent receptor {ECO:0000313|EMBL:KGM55610.1}; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daejeonensis GH1-9.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 57.4
  • Coverage: 955.0
  • Bit_score: 1081
  • Evalue 0.0
TonB-dependent outer membrane receptor protein similarity KEGG
DB: KEGG
  • Identity: 53.0
  • Coverage: 946.0
  • Bit_score: 997
  • Evalue 2.30e-288

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Lysobacter daejeonensis → Lysobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2802
ATGGTTGTTCGTCAACGACACATCCTTCGCCGCCCGCTGACGCTGGCGCTTGCCGCGGCGCTGGCCCTGCCCGCCGTCGCCGCCGCCCAGCAGAGCGACGAGAAGGCCAAGGATCTGGACAAGGTGGTCGTCACCGGTTCGCTGATCCCCCAGACCCAGGTCGAGACCTTCGTCCCGGTCACCATCATCTCCGCCGAGGACATCCAGGCCCGCGGCTTCAACAATGTCGCTGAAGTGCTGCAGAAGAGCAGCTTCGCCACCGGCGGCGTGCAGAACAACCAGAGCTCCGCCTCGTTTACCCAGGGCGCCGAGACGCTCAGCCTGTTCGGCCTGTCCGCCAGCTACGTGAAGTACCTGATCGACGGCCGACCGATGGCCAACTACCCGGCGCTGTACAACGGCTCCGACGTGTTCAACAACATCAGCGGCATCCCGGTGGAGCTGGTCGAGCGCATCGAGATCCTGCCCGGTGGCCAGTCGTCGCTTTACGGCTCCGACGCCATCGCCGGCGTGGTCAACATCATCCTCAAGAAGAACGTGGACGGCAGCGTCCTCAGCGCGCGCATCGGCGCCTTCGACCAGGGCGGCGGCAAGAACGGCCGCCTGAGCTTCGCCACCAGCCTCAGCAACGCCGACGGCCGCTGGAACACCCTGCTGGGCGTGCAGGCCGAGAAGGCCGACCCGGTGTGGGCGCACCAGCGCGACCTGACCGCGCAGTTCAACCCCGATGCCTACAACGGCGCGCCGGCGCTGGCCAGCCGCGACTGGGCGATCTTCGATGAGCTCAACGGCGGCTACCTGTTCCTCGACCCGGCCAACTGCGCCAACGTCACCGGCGGCTTCGACGGCACCGTGGGCAAGCGCACCCGCGCCGGTTCCGGCGACTACTGCGGCTCCTTCCAGACCCCGGGCTACCGCACCCTGAAGAACGAGAAGGAAGGCGCGCAGGTGTATGCGCACTCCACCTTCGAGCTGACCGACCTGGCGCAGGCCTATGCCGACGTGCTGGTGAGCCACGAGCGCGTCAAGTACAACATCGGCTCCGGCTACCAGTGGTGGGGCACCAGCGTGAAATGGGGCGCGTTCTACGACCCCAACCTCGACACCCTGGTGAACCTGCAGCGCGCCTTCACCCCGGAGGACATGGGCGGCTGGGAAAACGGCATGAGCGAGAACCGCAGCACGTCCTACGCGGTCACCCTCGGCGTGAACGGTACCCTCGGCGAGGACTCGAACTGGGACTATGACGTCGGCCTGACGCGCACCCAGTACAAGCTGACCGAAACCGACCTCAACCGCCTGTCGTCGATCGACGACTACTTCCAGCAGAAGGTACTGGGCGAACAGCAGGGCTGGGATCCGATCTTCGACGCCTACCCGGTGTTCACCCCCGACTACGCGGCCTTCTACAAGCTGATGTCGCCCGCCGACTTCTACAGCTTCATGGCGACGACCAAGTCGCACAGCCGCACCTACGACAACATGCTGCGCGCGCAGTTCACCAACGGCGCGCTGTTCTCGCTGCCGGGCGGCGACGCCGGTGCGGCGATCGCCGTGGAAGCCAGCACCCAGGGCTGGGCCTATACCCCCGACGCGCTGCTGCTCAACGGCGACATCTGGGGCACCAAGGCAGTCAGCGGCAAGGGCCAGCGCTCGCGCTACGCGGTGACCGGCGAACTGCGCCTGCCGGTGTGGGAGCAGCTGACCGTGTCGGCTTCGGCCCGCTACGACGGCTTCCGCGCCGCCGGCCGCACCGTCGACAAGCCGACCTACAGCATCGGCCTGGAATACCGTCCGTTCGAATCGCTGCTGCTGCGCGGCAAGTACGGCACCGCCTTCAAGGCGCCGACCCTCGCCGACCAGTTCCAGGGCGTCAGCGGCTTCTACGGTTACAGCGTCGACTACTACAACTGCGCCCTGCTGGGCTTCGACGCCGGCGAAGTGGCTGACTGCCCGCAGCAGTACGCCGACCTGCAGTACGAAGGCGAGCAGTCCGGCAACCCGGACCTGAAGCCGATCAACGCGACCGTGTGGAGCTACGGCGTGGTGTGGGCGCCGACCGCCAAGTTCTCGCTGAGCGCCGACTACCACCACTGGAACATCCGCAACGAGGTCGAGCTGCAGAACGTCGACCAGCTGATGCGCGATGAAGCCAACTGCCGCCTCGGCACGCTGGACATCAACTCCGGCACCTGCCAGGCCGCGCTGGCCCAGGTCACCCGTGCCGCCAACGGCGATGTGCAGAAGATCTTCCTGAGCAAGGTCAACGTGGCGCAGGAAACCCTTGATGCGGTGACCGTGGATGCCAACTACCGCCAGGATCTGGGCGCCTGGGGCGCGCTGACCCTGGCCGGTTCGTGGACCCGCAACCTCAAGCACGAGATCCAGACCTACCCGACCGACCCGGTGGTGGACGCGCTGAGCGACCCGTACTGGAGCACGGACGCCAAGTACAAGGCGAACGCGTCGGCCAGCTGGAACAAGGACCGCTGGACGACCACCGTCTATGCCAACTACCTCGGCCCGACCCCGAACTACCGCGCCACGCTGGACCCGGCCGGTTACGCGTTCGCCGGTGCCGGCCGCCTGGGTTCGTACACCACGGTCAACGCCAGCGTGAACTTCGACGCCACCGACGCGCTGAAGCTCTCGTTCCTGGTCAACAACCTCGGCAACCGCATCCCCGACATGGACGTCCGTTCCTACCCGGGCACCAGCGGCGCGCCGTACAACAGCGCCAACTTCGACATCCTGGGCCGCGCCTACTACCTCGAAGCCCGCTGGAGCTTCGGCAAGAAGTAA
PROTEIN sequence
Length: 934
MVVRQRHILRRPLTLALAAALALPAVAAAQQSDEKAKDLDKVVVTGSLIPQTQVETFVPVTIISAEDIQARGFNNVAEVLQKSSFATGGVQNNQSSASFTQGAETLSLFGLSASYVKYLIDGRPMANYPALYNGSDVFNNISGIPVELVERIEILPGGQSSLYGSDAIAGVVNIILKKNVDGSVLSARIGAFDQGGGKNGRLSFATSLSNADGRWNTLLGVQAEKADPVWAHQRDLTAQFNPDAYNGAPALASRDWAIFDELNGGYLFLDPANCANVTGGFDGTVGKRTRAGSGDYCGSFQTPGYRTLKNEKEGAQVYAHSTFELTDLAQAYADVLVSHERVKYNIGSGYQWWGTSVKWGAFYDPNLDTLVNLQRAFTPEDMGGWENGMSENRSTSYAVTLGVNGTLGEDSNWDYDVGLTRTQYKLTETDLNRLSSIDDYFQQKVLGEQQGWDPIFDAYPVFTPDYAAFYKLMSPADFYSFMATTKSHSRTYDNMLRAQFTNGALFSLPGGDAGAAIAVEASTQGWAYTPDALLLNGDIWGTKAVSGKGQRSRYAVTGELRLPVWEQLTVSASARYDGFRAAGRTVDKPTYSIGLEYRPFESLLLRGKYGTAFKAPTLADQFQGVSGFYGYSVDYYNCALLGFDAGEVADCPQQYADLQYEGEQSGNPDLKPINATVWSYGVVWAPTAKFSLSADYHHWNIRNEVELQNVDQLMRDEANCRLGTLDINSGTCQAALAQVTRAANGDVQKIFLSKVNVAQETLDAVTVDANYRQDLGAWGALTLAGSWTRNLKHEIQTYPTDPVVDALSDPYWSTDAKYKANASASWNKDRWTTTVYANYLGPTPNYRATLDPAGYAFAGAGRLGSYTTVNASVNFDATDALKLSFLVNNLGNRIPDMDVRSYPGTSGAPYNSANFDILGRAYYLEARWSFGKK*