ggKbase home page

scnpilot_solids1_trim150_scaffold_3767_curated_10

Organism: solids_Xanthomonadales_2

partial RP 17 / 55 MC: 2 BSCG 18 / 51 MC: 2 ASCG 7 / 38
Location: comp(6112..6435)

Top 3 Functional Annotations

Value Algorithm Source
Serine hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00051}; Short=SHMT {ECO:0000256|HAMAP-Rule:MF_00051};; Short=Serine methylase {ECO:0000256|HAMAP-Rule:MF_00051};; EC=2.1.2.1 {ECO:0000256|HAMAP-Rule:MF_00051};; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daejeonensis GH1-9.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 89.7
  • Coverage: 107.0
  • Bit_score: 204
  • Evalue 6.70e-50
glycine hydroxymethyltransferase (EC:2.1.2.1); K00600 glycine hydroxymethyltransferase [EC:2.1.2.1] similarity KEGG
DB: KEGG
  • Identity: 80.4
  • Coverage: 107.0
  • Bit_score: 182
  • Evalue 6.10e-44
Serine hydroxymethyltransferase id=2615361 bin=GWF1_Xanthomonadales_69_6 species=unknown genus=Rhodanobacter taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 86.1
  • Coverage: 108.0
  • Bit_score: 197
  • Evalue 7.60e-48

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Lysobacter daejeonensis → Lysobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 324
TCCGGTGGTACCCAGAACCACCTGATGCTGGTCGACATGATCGGCAAGGACGTGTCCGGCAAGCAGGCGGAAGAGGCGCTGGGCAAGGCCCACATCACCGTCAACAAGAACTCGGTGCCGAACGACCCGCGCAAGCCCTTCGTCACCTCCGGCCTGCGCATCGGCACCCCGGCGGTCACCACCCGCGGCTACAAGGAGCCCGACTGCGTGGCGCTGGCCGAGTGGATCTGCGACGTGCTGGACAACCCCAACGACGACAACGTGATCGCCGGCGTGCGCGCGAACGTCGAGAAGCAGTGCAAGCAGTTCCCGGTCTACGGCTGA
PROTEIN sequence
Length: 108
SGGTQNHLMLVDMIGKDVSGKQAEEALGKAHITVNKNSVPNDPRKPFVTSGLRIGTPAVTTRGYKEPDCVALAEWICDVLDNPNDDNVIAGVRANVEKQCKQFPVYG*