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scnpilot_solids1_trim150_scaffold_4023_curated_4

Organism: solids_Xanthomonadales_2

partial RP 17 / 55 MC: 2 BSCG 18 / 51 MC: 2 ASCG 7 / 38
Location: comp(3663..5243)

Top 3 Functional Annotations

Value Algorithm Source
Choline dehydrogenase (EC:1.1.99.1) similarity KEGG
DB: KEGG
  • Identity: 67.8
  • Coverage: 528.0
  • Bit_score: 721
  • Evalue 2.30e-205
choline dehydrogenase n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI000302E72D similarity UNIREF
DB: UNIREF100
  • Identity: 68.0
  • Coverage: 525.0
  • Bit_score: 722
  • Evalue 4.30e-205
GMC family oxidoreductase {ECO:0000313|EMBL:KGM55228.1}; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daejeonensis GH1-9.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.3
  • Coverage: 530.0
  • Bit_score: 787
  • Evalue 1.50e-224

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Taxonomy

Lysobacter daejeonensis → Lysobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1581
GTGTACGACTACATCATCATCGGCGCCGGTTCTGCCGGCTGCGTCCTGGCCAACCGCCTGAGCGAGGACCCGGCGGCCAAGGTGCTGCTGCTGGAAGCGGGCGGCCGCGACTGGCACCCGTTCGTGCACATGCCCGCCGGCCTTGCCCGCATCGCCGGGCTGAAATCGATCAACTGGGACTACGCCACCGTGCCGCAGCCACAGCTGGGCGGGCGGGTGCTGTGGTGCCCGCGCGGCAAGCTGCTGGGCGGCTCCAGCTCGATCAACGCGATGTGCTACATCCGCGGCGTCGCCGCCGACTACGACGCCTGGGCGGCCGGCGGCGCCAGCGGCTGGCACTGGGACAATGTGCTGCCCTACTTCCGCAGATCCGAAGGCAATGCCCGCGGCGAAGACGCATGGCATGGCGCCGATGGCCCGCTGTGCGTGTCCGATCTGCGCCACGTCAACCCGCTCACCCGCGTCTTCGTCGAAGCCGGCCAGCAGGCCGGGCTGGGCCTCAACGACGACTTCAACGGCGCCCGGCAGGAAGGCGTGGGCCTGTATCAGGTCACCCAGCGCGACGGCGCGCGCTGCTCGGCGGCGGTGGCCTACCTCGACCCGGCGAAAGCGCGCCCCAACCTGACCATCCGCACACACGCCGAGGTCAGCCGGATCACCTTCGAACGCGGCCGCGCCAACGGCGTGGTCTGCTCGATCAAGGGCCAGGGTTTCCATTTCGAGGCCGCGCGCGAAGTGATCCTCAGCGGCGGCGCGATCAATTCACCGCAGCTGCTGATGCTGTCCGGCATCGGCCCCGCCGACGAACTGCGCCGACTCGGCATCGAGGTGCTGCACGATGCACCGGGCGTCGGCGCCAACCTGCAGGACCACCTCGACGTCACCACCCTGCAGCACTGCACCCAGCCGATCAGCTACGACCGCATCAGCGAGGTCAAGACCGCGCTGCAGTATTACCTCGGCGGACATCAGGGTCCGGGCACCAGCAACGTGGCGGAGGGCGCGGGCTTCGTGCGCTCCCGCCTGGCGCAGGATGCGCGCGCCGACATCCAGCTGCACTTCATCCCGGCAATGATCGACGACCACGGCCGCAACCGCCTGCGCGGCGACGGATACACCCTGCACGCCTGCTTCCTGCGCCCGCGCAGCCGCGGCAGCGTGCGGCTGGCCAGCAACCGCGCCGCCGACAAGCCGATCATCGACCCCAACTACCTTGGCGATGCGGAAGGTTTCGACCGCCGCATGCTGGTGGAATGCGCAAAACTGTCGCTGGAAATCCTGGCGCAGAAGGCATTCGATCCCTATCGCGGCGCGCCGATCTTCCCCGCCACGCCCCCGCGTACCGACGCCGAGTTCCTCGAGTTCGTGCGCAACCGCGCCGAAACCGTCTACCACCCCATCGGAACCTGCCGGATGGGCAGCGACGACACCGCGGTGGTCGACCCGCAGCTGCGCGTGCGCGGCGTGGACGGCCTGCGCGTGGTTGACGCCTCGGTGATGCCGGACCTGCCGGGTGGCAACACCAACGCGCCGACGATCATGATTGCGGAGCGGGCGGCGGACCTGATCAAGGCAAGCTGA
PROTEIN sequence
Length: 527
VYDYIIIGAGSAGCVLANRLSEDPAAKVLLLEAGGRDWHPFVHMPAGLARIAGLKSINWDYATVPQPQLGGRVLWCPRGKLLGGSSSINAMCYIRGVAADYDAWAAGGASGWHWDNVLPYFRRSEGNARGEDAWHGADGPLCVSDLRHVNPLTRVFVEAGQQAGLGLNDDFNGARQEGVGLYQVTQRDGARCSAAVAYLDPAKARPNLTIRTHAEVSRITFERGRANGVVCSIKGQGFHFEAAREVILSGGAINSPQLLMLSGIGPADELRRLGIEVLHDAPGVGANLQDHLDVTTLQHCTQPISYDRISEVKTALQYYLGGHQGPGTSNVAEGAGFVRSRLAQDARADIQLHFIPAMIDDHGRNRLRGDGYTLHACFLRPRSRGSVRLASNRAADKPIIDPNYLGDAEGFDRRMLVECAKLSLEILAQKAFDPYRGAPIFPATPPRTDAEFLEFVRNRAETVYHPIGTCRMGSDDTAVVDPQLRVRGVDGLRVVDASVMPDLPGGNTNAPTIMIAERAADLIKAS*