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scnpilot_solids1_trim150_scaffold_1364_curated_1

Organism: solids_Xanthomonadales_2

partial RP 17 / 55 MC: 2 BSCG 18 / 51 MC: 2 ASCG 7 / 38
Location: comp(3..635)

Top 3 Functional Annotations

Value Algorithm Source
Rhomboid family protein n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WUJ9_PSEUU similarity UNIREF
DB: UNIREF100
  • Identity: 65.8
  • Coverage: 190.0
  • Bit_score: 237
  • Evalue 1.70e-59
Membrane protein {ECO:0000313|EMBL:KGM50932.1}; TaxID=1122185 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter concretionis Ko07 = DSM 16239.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 63.7
  • Coverage: 193.0
  • Bit_score: 239
  • Evalue 3.70e-60
rhomboid family protein similarity KEGG
DB: KEGG
  • Identity: 65.8
  • Coverage: 190.0
  • Bit_score: 237
  • Evalue 5.30e-60

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Taxonomy

Lysobacter concretionis → Lysobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 633
GTGGGCGCCGCGCTGAGCGGCTATGATGCGCTGCAAAGTAACCGGAATGTCGCACGGATGCCGTTCAACCTCCCCCGAGTCACCAAGGCGCTGCTGATCGCCAACGGCGTCGGCTTCCTGCTGCAATGGCTGCTGGGCAATCAGCGGCTGGTGACCCTGATGCTGTGGCCGTGGGGCGATGTCGATTTCGACCCGGCCGGCATGGCGCCCGCGTTCATGCCGTGGCAGCTGGTGAGCTACAGCTTCCTGCATGGCGGCTTCCTGCATCTGGCCTTCAACATGCTAGCGTTGGCGATGTTCGGCGCGCCGCTGGAATACACCTGGGGCGAACGCCGCTTCCTGACCTATTACCTGGTGAGCGTGGTCGGCGCCGGTATCTGCCAGCTGCTGGTCGGTTCCTATGCGCTGGCGCAGGGTGCCGATCCGTATCCCACCATCGGCGCTTCCGGCGGCGTATTCGGCCTGCTGCTGGCGTACGGCATGCTGTTCCCGCACCAGCGGGTGATGCTGCTGTTCCCGCCGATCCCGATGAAGGCGCGCACGCTGGTGATCGTCTACGGCCTGTTCGAACTGGGCGCCGATCCCGATGAAGGCGCGCACGCTGGTGATCGTCTACGGCCTGTTCGAACTGGG
PROTEIN sequence
Length: 211
VGAALSGYDALQSNRNVARMPFNLPRVTKALLIANGVGFLLQWLLGNQRLVTLMLWPWGDVDFDPAGMAPAFMPWQLVSYSFLHGGFLHLAFNMLALAMFGAPLEYTWGERRFLTYYLVSVVGAGICQLLVGSYALAQGADPYPTIGASGGVFGLLLAYGMLFPHQRVMLLFPPIPMKARTLVIVYGLFELGADPDEGAHAGDRLRPVRTG