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scnpilot_solids1_trim150_scaffold_1364_curated_12

Organism: solids_Xanthomonadales_2

partial RP 17 / 55 MC: 2 BSCG 18 / 51 MC: 2 ASCG 7 / 38
Location: comp(10778..12646)

Top 3 Functional Annotations

Value Algorithm Source
Protein translocase subunit SecD n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WUK9_PSEUU similarity UNIREF
DB: UNIREF100
  • Identity: 60.1
  • Coverage: 622.0
  • Bit_score: 725
  • Evalue 6.10e-206
Protein translocase subunit SecD {ECO:0000256|HAMAP-Rule:MF_01463}; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daejeonensis GH1-9.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 66.2
  • Coverage: 622.0
  • Bit_score: 816
  • Evalue 2.80e-233
protein-export membrane protein SecD; K03072 preprotein translocase subunit SecD similarity KEGG
DB: KEGG
  • Identity: 60.1
  • Coverage: 622.0
  • Bit_score: 725
  • Evalue 1.90e-206

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Taxonomy

Lysobacter daejeonensis → Lysobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1869
ATGCTCGAATATTCCCGCCTGAAATACCTGTTGATCCTGCTGACGCTGGCGCTCAGCGTGCTGTACGCGGTGCCGAACGCGTTCCCGCAGGATCCCGCCGTGCAGATCACCGCCAACCGCGGTGCGAAGGTGGACGAAGCGCTGAAGCAGCGGGTCGACGTCCTGCTGAAGCAGGCCTCGGTCACGGTCATCGGCAGCGAGATCGACAAGGACGGCAACCTGCTGGTGCGCACCGCCACCGACGACGACCAGACCCGGGTGGCCGATATCGTCCGGGAAGAACTGGGCAGCGGCTATGTGGTCGCGCTGAACCAGGCATCCACCGTGCCGGCCTGGATGCAGAAGATCGGCGCCAAGCCGATGTTCCTGGGCCTGGACCTGCGTGGTGGCGTCTACTTCCTGATGCAGGTGGACCGCCAGGCGGCGTTGACCAAGCGCTTCGAGGCGACCGCGGAGGACATCCGCAGCCTGCTGCGCGACAACCGCATCCGCTACATCTCGGTGGAGCCGACCGCCGGCGGCACGGTGGTCGCCAAGCTCGGCGCGGGCCAGAACCTGGCCGAGGCGCGCCGCCTGATCGGCCGCGACATGCCGACCTACCAGATCGAGGGGGAGGGCGAGACGCTGAGCGTGCGCATCCCCGAGGCCGAGCTCGACAAGATCCTGACCGACGCGGTGCAGCAGAACATCGGCACCCTCAGCAACCGCATCAACGAACTGGGCGTGGCCGAGCCGATCATCCAGCGCCAGGGTGCCGACCGCGTGGCGGTGCAGCTGCCCGGCGTGCAGGACACCGCGCAGGCCAAGCGCATCCTCGGCGCCACCGCGACCCTGGAATACCGCGGCGTGGTCGAGGGCAATGCCGTCGAGGCGCGCGACACCGGCAACGTGCCGCCCGAGGCGCGCGTCTATGCCCGCAAGGAAATCGGCCCGGACGGCAAGCCGCTGCCGGTGCTGCTGAACAAGCGGGTGATCGCCTCCGGCGAGCAGCTGCAGAGCGCGTCTTCGTTCTTCGATTCGCAGAGCGGCACCCCCGCGGTGCGCGTGCGCCTGAACGCGGTCGGTGGCCAGCGCATGTTCGACTACTCCAGCGCCCACGTCGGCAAGCCGATGGCGGTGGTCTACATCGAGCGCATCCCCGAGGTGAAGATCGTCGACGGCAAGGAGGTGCACACCACCCGCACCAACGAGCAGGTCATCTCGGTCGCGACCATCCAGGGCACGCTGGGCAAGGAGTTCCAGACCACCGGCCTGGAAAGCATGAAGGAAGCCTCGGACCTGGCCCTGCTGCTGCGTGCCGGCGCGCTGGCGGCGCCGATGGACTTCGTCGACGAGCGCACCATCGGCCCGAGCCTGGGCAAGGAGAACATCGACCGCGGCCTGAAGGCGGTGGGCTTCTCCTTCATCTTCGCGCTGGGCTTCTTCCTGATCTATTACCGGATGTTCGGCCTGATCACCTGCCTTGCGCTGCTGATCAACCTGCTGATGGTGTTCGCGCTGATGTCGGTGATCGGCGCCACCATGAGCCTGCCGGGCCTCGCCGGCATCGCGTTGACCGTGGGCATGTCGGTGGACGCCAACGTGCTGATCAACGAACGCATCCGCGAGGAACTGCGGCTGGGCTTGCCACCGCAGAAGGCGATCGCCGAAGGCTACGATCGCGCATCCGGCACCATCCTCGACGCCAACGTCACCGCCTTCCTCGCCGGCCTGGCCATGTTCGCCTTCGGCAGCGGCCCGCTGAAGGGCTTCGGCATGACCACCATGCTCGGCATCATCACCTCGGCGTATACCGCGGTGTCGGTCTCGCGCGGCATCGCCACGCTGATCTACGGCGGCAAGCGCAAGCTGAAGTCGGTCGCGATCTAA
PROTEIN sequence
Length: 623
MLEYSRLKYLLILLTLALSVLYAVPNAFPQDPAVQITANRGAKVDEALKQRVDVLLKQASVTVIGSEIDKDGNLLVRTATDDDQTRVADIVREELGSGYVVALNQASTVPAWMQKIGAKPMFLGLDLRGGVYFLMQVDRQAALTKRFEATAEDIRSLLRDNRIRYISVEPTAGGTVVAKLGAGQNLAEARRLIGRDMPTYQIEGEGETLSVRIPEAELDKILTDAVQQNIGTLSNRINELGVAEPIIQRQGADRVAVQLPGVQDTAQAKRILGATATLEYRGVVEGNAVEARDTGNVPPEARVYARKEIGPDGKPLPVLLNKRVIASGEQLQSASSFFDSQSGTPAVRVRLNAVGGQRMFDYSSAHVGKPMAVVYIERIPEVKIVDGKEVHTTRTNEQVISVATIQGTLGKEFQTTGLESMKEASDLALLLRAGALAAPMDFVDERTIGPSLGKENIDRGLKAVGFSFIFALGFFLIYYRMFGLITCLALLINLLMVFALMSVIGATMSLPGLAGIALTVGMSVDANVLINERIREELRLGLPPQKAIAEGYDRASGTILDANVTAFLAGLAMFAFGSGPLKGFGMTTMLGIITSAYTAVSVSRGIATLIYGGKRKLKSVAI*