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scnpilot_solids1_trim150_scaffold_4654_curated_4

Organism: solids_Xanthomonadales_2

partial RP 17 / 55 MC: 2 BSCG 18 / 51 MC: 2 ASCG 7 / 38
Location: comp(2352..3146)

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridylate synthase I {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA-uridine isomerase I {ECO:0000256|HAMAP-Rule:MF_00171}; TaxID=913325 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter arseniciresistens ZS79.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 71.8
  • Coverage: 255.0
  • Bit_score: 380
  • Evalue 2.20e-102
truA; tRNA pseudouridine synthase A (EC:5.4.99.12); K06173 tRNA pseudouridine38-40 synthase [EC:5.4.99.12] similarity KEGG
DB: KEGG
  • Identity: 70.7
  • Coverage: 259.0
  • Bit_score: 376
  • Evalue 9.30e-102
tRNA pseudouridine synthase A n=1 Tax=Xanthomonas sp. SHU199 RepID=UPI00036064E1 similarity UNIREF
DB: UNIREF100
  • Identity: 70.3
  • Coverage: 259.0
  • Bit_score: 377
  • Evalue 1.30e-101

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Taxonomy

Lysobacter arseniciresistens → Lysobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 795
ATGCGGTTGGCACTCGGGGTCGAATACGACGGCAGCGGCTTTTCGGGCTGGCAGCGGTTGAGCCAGGCCGGCGCGCTGGAGGCCGACGGCAGCCTGCAGACCGCGCTGGAGATGGCGTTGTCGAAAGTCGCCGCTGCGCCCATCGACACCGTCTGTTCCGGCCGCACCGATGCCGGCGTGCATGCGCGCTGCCAGGTGGTGCATTTCGATACCGAAGCCACGCGCGACGCGCGCGGCTGGATCCTCGGCACCACCGCCAACCTGCCGCCGACCATGGCGGTGCGCTGGTGCGTGCCGGTGGCCGACGATTTCAACGCGCGCTTCTCGGCGCGCGCGCGCCGCTACCGCTACCGCATCCTCAACCGCGGCGCGCGGCCGGGGCTGGAGCGCCAGTACCTGGGCTGGGAGCGCATGCCGCTCGACGCCGACGCCATGCACGAAGCCGCGCAGGCGCTGCCCGGCGAGCGTGATTTCTCCGCCTTCCGCAGCGCCCAGTGCCAGGCCACCCATGCGCGCCGGAACCTGCAGGACATTTCCGTCACCCGCGCCGGCGACGAAGTGGTGGTCGAGGTGCAGGCCAACGCCTTCCTCCACCACATGGTGCGCAACATCGTCGGCTCGCTGCTGGTGGTGGGGCGTGGCGAGCGGCCGGTGGGGTGGATCGCCGAGTTGCTGGAGGGGCGCGACCGCACCGTCGCCGGCCCCACCGCGCCGTCGGCCGGGCTGCTGTTCCTCGGGCCAAAATATCCGCCGCACTGGAACCTGCCGGCCGAAGCCTGCGGGGAGTTCGAGTAG
PROTEIN sequence
Length: 265
MRLALGVEYDGSGFSGWQRLSQAGALEADGSLQTALEMALSKVAAAPIDTVCSGRTDAGVHARCQVVHFDTEATRDARGWILGTTANLPPTMAVRWCVPVADDFNARFSARARRYRYRILNRGARPGLERQYLGWERMPLDADAMHEAAQALPGERDFSAFRSAQCQATHARRNLQDISVTRAGDEVVVEVQANAFLHHMVRNIVGSLLVVGRGERPVGWIAELLEGRDRTVAGPTAPSAGLLFLGPKYPPHWNLPAEACGEFE*