ggKbase home page

scnpilot_solids1_trim150_scaffold_3819_curated_8

Organism: solids_Xanthomonadales_2

partial RP 17 / 55 MC: 2 BSCG 18 / 51 MC: 2 ASCG 7 / 38
Location: 8052..10265

Top 3 Functional Annotations

Value Algorithm Source
Isocitrate dehydrogenase {ECO:0000313|EMBL:KGM53215.1}; EC=1.1.1.42 {ECO:0000313|EMBL:KGM53215.1};; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daejeonensis GH1-9.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 85.2
  • Coverage: 736.0
  • Bit_score: 1262
  • Evalue 0.0
isocitrate dehydrogenase (EC:1.1.1.42); K00031 isocitrate dehydrogenase [EC:1.1.1.42] similarity KEGG
DB: KEGG
  • Identity: 75.7
  • Coverage: 738.0
  • Bit_score: 1111
  • Evalue 0.0
Isocitrate dehydrogenase n=1 Tax=Stenotrophomonas maltophilia MF89 RepID=T5L6D5_STEMA similarity UNIREF
DB: UNIREF100
  • Identity: 76.2
  • Coverage: 738.0
  • Bit_score: 1113
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Lysobacter daejeonensis → Lysobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2214
ATGTCCAAGATCCTCTACACCCTGACCGACGAAGCGCCGTTCCTGGCCACCGCCTCGTTCCTGCCGATCGTGCAGGCGTATGCGAAGACCGCCGGGGTGGCGGTGGAGACGCGCGACATCTCGCTGGCGGCACGGATCCTGGCGCAGTTCCCGGAGCTGCTGGGCGAGCGCGCGGTGGCGGACGACCTGCGCGAGCTGGGCGAGCTGGCCAAGACGCCGGAAGCCAACATCATCAAGCTGCCCAACATCAGCGCCTCGATCCCGCAGCTGAAGGCCGCGATCAAGGAGTTGCAGGACCGCGGCTACCCGCTGCCGGACTACCCGGACGCGCCGCAGGGCGAAAGCGAAAAGGACGTCAAGGCGCGCTACGACCGGGTCAAGGGCAGCGCGGTGAACCCGGTGCTGCGCGAGGGCAATTCCGACCGCCGCGCGCCGAAGGCGGTGAAGGCCTATGCCAAGAAGCATCCGCACCGGATGGGCAAGTGGGAGGCCTCCTCGAAGTCGCACGTGGCGCACATGGCGGCCGGCGATTTCTACGGCAGCGAGCAGAGCTACACCATGGTCAACGCCGGCCCGGTGCGGATCGAATACACCAGCGTGACCGGCAGCAGCTTCCCGCTGCGCGGCCCGGTCATGCTGCAGGCCGGCGAGATGATCGACGCGGCGGTGATGAGCGCCGGCGCGCTGGCCGATTTCATCGATGCGCAGATCGCCGATGCCAAGGCCAAGGACGTGCTGTTCTCGCTGCACCTGAAGGCGACCATGATGAAGGTCAGCGACCCGATCATGTTCGGCATCGCGGTGTCGCGCTTCTACGCGCCGGTACTGGAAAAGCATCCGCGCACGCTGGCCGAAATCGGTTTTGACCCCAACAACGGCATCGGCGACCTGTACGCCAAGCTGGGCCAGCTGGCCGAATCCGAGCGCAGTGCGATCGAAGCCGAGATCAAGGCGCTGTACGCGCAGCGCCCGGGCCTGGCGATGGTCAATTCCGACAAGGGCATCACCAACCTGCACGTGCCGTCCGACGTGATCGTGGACGCCTCGATGCCGGCGATGATCCGCGACAGCGGCCGCATGTGGAACGCCAAGGGCGAGCTGCAGGACACCAAGGCGGTGATCCCGGACCGCAACTACGCCGGCATCTACCAGGTGGTGATCGACGACTGCAAGGAACACGGTGCGTTCGACCCGGCGACCATGGGTAGCGTGCCCAACGTCGGGCTGATGGCGCAGGCGGCCGAGGAATACGGCAGCCACGACAAGACCTTCAAGATCGCCGGCGATGGCGTGGTGCGGGTGATCGACGAGCACGGCACCGTGCTGCTGCAGCATCCGGTCCAGGCCGGTGACATCTGGCGCATGTGCCAGACCAAGGACGCGCCGGTCCGCGACTGGGTGAAGCTGGCGGTGAGCCGCGCGCGCCTGTCGGACACCCCGGTGGTGTTCTGGCTGGATCCGCAGCGCGACCACGACCGCGGCCTGATCGCCAAGGTGGCCGCCTATCTCAACGACCACGACACCGCCGGTCTGGACATCCGCATCCTCTCGCCGGTGGAGGCGATGAAGTTCTCCCTCAAGCGCATCCGCGAAGGCCTGGACACCATCAGCGCCACCGGCAACGTGCTCCGCGATTACCTGACCGACCTGTTCCCGATCATGGAGCTGGGCACCAGCGCCAAGATGCTGTCGATCGTGCCGCTGATGAACGGCGGCGGCCTGTTCGAGACCGGCGCCGGCGGCAGCGCGCCCAAGCACGTGCAGCAGTTCGTGGAGGAGGACTACCTGCGCTGGGATTCGCTGGGCGAGTTCCTGGCGCTGGCCGCCTCGTTCGAGCACCTGGCCAACACCACCGGCAACGCGCGTGCGCAGGTGCTGGCGGACGCGCTGGACGCCGCCAACGCGAAGTTCCTCGACAACGACCGCTCGCCGGGCCGGAAGCTGGGCACGATTGACAACCGCGGCAGCCATTTCTACGTGGCGCTGTACTGGGCGCAGGCGCTGGCCGAGCAGAGTGCGGACACGGAGCTGGCGGCGAAGTTCGCGGCGGTCGCCCAGGCGCTGGCGGACAACGAAGCGAAGATCGTCGAGGAACTCGTCGCCGTACAGGGCAAGCCGGTGGACATCGGCGGCTACTACCAGCCGGACATGGGCAGGCTGTCGGCGGCGATGCGGCCGTCGGCCACGCTGAACGCGGCACTGGCGATGCTGTAA
PROTEIN sequence
Length: 738
MSKILYTLTDEAPFLATASFLPIVQAYAKTAGVAVETRDISLAARILAQFPELLGERAVADDLRELGELAKTPEANIIKLPNISASIPQLKAAIKELQDRGYPLPDYPDAPQGESEKDVKARYDRVKGSAVNPVLREGNSDRRAPKAVKAYAKKHPHRMGKWEASSKSHVAHMAAGDFYGSEQSYTMVNAGPVRIEYTSVTGSSFPLRGPVMLQAGEMIDAAVMSAGALADFIDAQIADAKAKDVLFSLHLKATMMKVSDPIMFGIAVSRFYAPVLEKHPRTLAEIGFDPNNGIGDLYAKLGQLAESERSAIEAEIKALYAQRPGLAMVNSDKGITNLHVPSDVIVDASMPAMIRDSGRMWNAKGELQDTKAVIPDRNYAGIYQVVIDDCKEHGAFDPATMGSVPNVGLMAQAAEEYGSHDKTFKIAGDGVVRVIDEHGTVLLQHPVQAGDIWRMCQTKDAPVRDWVKLAVSRARLSDTPVVFWLDPQRDHDRGLIAKVAAYLNDHDTAGLDIRILSPVEAMKFSLKRIREGLDTISATGNVLRDYLTDLFPIMELGTSAKMLSIVPLMNGGGLFETGAGGSAPKHVQQFVEEDYLRWDSLGEFLALAASFEHLANTTGNARAQVLADALDAANAKFLDNDRSPGRKLGTIDNRGSHFYVALYWAQALAEQSADTELAAKFAAVAQALADNEAKIVEELVAVQGKPVDIGGYYQPDMGRLSAAMRPSATLNAALAML*