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scnpilot_solids2_trim150_scaffold_423_curated_20

Organism: solids_Actinobacteria_2

near complete RP 45 / 55 MC: 2 BSCG 45 / 51 MC: 1 ASCG 10 / 38
Location: comp(21488..21883)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L20 n=1 Tax=Frankia sp. EUN1f RepID=D3CXM5_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 80.2
  • Coverage: 126.0
  • Bit_score: 205
  • Evalue 4.50e-50
50S ribosomal protein L20 {ECO:0000256|HAMAP-Rule:MF_00382, ECO:0000256|RuleBase:RU000560}; TaxID=102897 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. EUN1f.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.2
  • Coverage: 126.0
  • Bit_score: 205
  • Evalue 6.30e-50
rplT; 50S ribosomal protein L20; K02887 large subunit ribosomal protein L20 similarity KEGG
DB: KEGG
  • Identity: 79.4
  • Coverage: 126.0
  • Bit_score: 203
  • Evalue 4.10e-50

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Taxonomy

Frankia sp. EUN1f → Frankia → Frankiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 396
ATGGCACGCGTGAAGCGGGGCATCAACGCCCAGAAGAAGCGCCGGGAGATCCTGGAGCACGCCTCCGGTTATCGGGGCCAGCGGTCCCGGCTGTACCGCAAGGCCAAGGAGCAGGTGCTCCACTCGCTGAACTACGCCTACCGTGACCGTCGCAAGCGCAAGGGCGATTTCCGCCAGCTGTGGATCACCCGCATCAACGCCGCCGCCCGCGCGCACGGCATGACCTACAACCGCTTCATGCAGGGCCTGCGCCTGGCGGGCGTCGAGGTGGACCGCAAGGTGCTGGCCGATCTCGCGGTGCGGGACGACGCCGCGTTCGCAGCCCTGGTCAAGGTCGCCCGCGACGCGGTCCCGACCGGTTCGGCAGCGGCTTCGGGTCACGAGGACGCGGCCTGA
PROTEIN sequence
Length: 132
MARVKRGINAQKKRREILEHASGYRGQRSRLYRKAKEQVLHSLNYAYRDRRKRKGDFRQLWITRINAAARAHGMTYNRFMQGLRLAGVEVDRKVLADLAVRDDAAFAALVKVARDAVPTGSAAASGHEDAA*