ggKbase home page

You do not have permission to do that.

Please email help@ggkbase.berkeley.edu for help.

scnpilot_solids2_trim150_scaffold_277_curated_23

Organism: solids_Actinobacteria_2

near complete RP 45 / 55 MC: 2 BSCG 45 / 51 MC: 1 ASCG 10 / 38
Location: comp(23790..24578)

Top 3 Functional Annotations

Value Algorithm Source
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155) RepID=A0QV63_MYCS2 similarity UNIREF
DB: UNIREF100
  • Identity: 58.6
  • Coverage: 261.0
  • Bit_score: 295
  • Evalue 6.60e-77
Transporter permease {ECO:0000313|EMBL:CDO30560.1}; TaxID=547163 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium avium complex (MAC).;" source="Mycobacterium vulneris.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 61.2
  • Coverage: 255.0
  • Bit_score: 299
  • Evalue 4.90e-78
binding-protein-dependent transport system inner membrane protein similarity KEGG
DB: KEGG
  • Identity: 58.6
  • Coverage: 261.0
  • Bit_score: 295
  • Evalue 2.10e-77

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Mycobacterium vulneris → Mycobacterium → Corynebacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 789
ATGACGACGGTGGACAGTCAGGCCCCGGCGTCGGCAGCCACCGGGGCTCGGCGACCCAGACGGTGGCGCGGCGCGGTTCCGATCGGCAGCGTCGTGGTGGCCGTGTTGGCGGTGCTGGTGTGGCACATCTCCGCCGGGTTGACGTTCGTCATCCCGTCGCCTGCCGCGACGCTGCGGGCGCTGGTCCGTGACCTGGGCGATGCCGGCTACCTCACGAACCTGCGATACACCATGGTCGCGTCGCTGTGGGCCTTCGTCATCGCGGTGCTGATCGGTCTGGCACTGGGGCTGCTGCTGGGCGGGTCCCGGCTGGCCAGCGTGATTTTCGAGCCATTGCTGGTGGCCCTCAACGGCGTTCCGAAGATCGTGATCTACCCGATCCTGCTGCCGATCTTCTCCCTCGGCATCGAGTCCAAGATTGCGATGGGGGTGCTGTTCGCGCTGTTCCCGGTGATGACGAACGTGACCACCGGCGTGCGGTCGATCCCCACCGTGTATTGGAAGCTGGCCCGCTCGGTGAACTGCTCGAAGTGGCAAACCCTGCTGCACATCGTGCTGCCCGCGCTGCGCCGCCCGCTGCTGACCGGGCTCCGGCTGGCGGTCAGCCTGGCGCTGGTCGGCGTGGTGCTGGGCGAATTCTTTGCCACCCGCTTCGGCCTGGGCCGGGTGGTGCTGCAGGCATACTCGGTGGGCAACTACGCCGACATGATGAGCTCGATCATTCTGCTGATCGCGATCTCGTTCGTCATCTCCCTGGTGTTGTGGGCGTTCGAACGGCGGGTGCGGTAA
PROTEIN sequence
Length: 263
MTTVDSQAPASAATGARRPRRWRGAVPIGSVVVAVLAVLVWHISAGLTFVIPSPAATLRALVRDLGDAGYLTNLRYTMVASLWAFVIAVLIGLALGLLLGGSRLASVIFEPLLVALNGVPKIVIYPILLPIFSLGIESKIAMGVLFALFPVMTNVTTGVRSIPTVYWKLARSVNCSKWQTLLHIVLPALRRPLLTGLRLAVSLALVGVVLGEFFATRFGLGRVVLQAYSVGNYADMMSSIILLIAISFVISLVLWAFERRVR*