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scnpilot_solids2_trim150_scaffold_378_curated_29

Organism: solids_Actinobacteria_2

near complete RP 45 / 55 MC: 2 BSCG 45 / 51 MC: 1 ASCG 10 / 38
Location: 32572..33447

Top 3 Functional Annotations

Value Algorithm Source
Carbohydrate ABC transporter membrane protein 2, CUT1 family n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SQP3_NOCSJ similarity UNIREF
DB: UNIREF100
  • Identity: 73.7
  • Coverage: 274.0
  • Bit_score: 414
  • Evalue 1.10e-112
ABC transporter permease {ECO:0000313|EMBL:EWT00393.1}; TaxID=1386089 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium oryzae NRRL B-24470.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 70.6
  • Coverage: 293.0
  • Bit_score: 419
  • Evalue 4.70e-114
binding-protein-dependent transport systems inner membrane component similarity KEGG
DB: KEGG
  • Identity: 73.7
  • Coverage: 274.0
  • Bit_score: 414
  • Evalue 3.40e-113

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Taxonomy

Intrasporangium oryzae → Intrasporangium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 876
ATGCCTGACACCACCGTCGCCGCCGCCACACTCACGCCGGTGCCGGCCGCGCCGTCCCGGCCGGGTCGGGTGGCCCGCCGGGCTGGGCTGTACGTGCTGGTGATCGCGTGCGCGGTCGTGATGCTGTTCCCGTTCCTGTGGACCGTGGTGACCTCGCTGACTCCGGGCGGTGACTTGGCGGGCGGGCCGAGCCTGTTCGTGCGCAACCCGACCCTGGATGCCTACCGCACCCTGATCGCAGCGATCCCGATCTGGCGGATCGTCATCAACTCGCTTGCCATCGCGATCGCCGCCACGTTGTGTCAACTGCTGACCGGCTCGATGGCCGCATATGCGTTCTCCCGGTTGCAATTCCGCGGCAAATCGGTGATCTTCGCCCTGTATCTGGCGACGCTGATGGTGCCGTTGGAAGTGCTGGTCGTCCCACTGTTCATCGAAATGAAAAAACTCGGCCTGCAGGACTCCTACTTCGCGCTGCTGGCCCCGTCGATCGCCTCCGCGTTCGGGATCTTCCTGGTCAAGCAGGCCATGGACGCGGTGCCCCGCGAACTCGACGAGGCCGCGACCATCGACGGCGGCAGCCATTTGCGGATTTACGCCACCATCATGATTCCGTTGGTACGGCCGGCGTTGGCCACGTTGGCGGTGTTCGCGTTCATGGGCAGTTGGAACTCGTTCCTGTGGCCGCTGGTAGTAATCCACTCTCCGGACCGGATGACGCTGCCGCTGGGCCTGTCGACATTGCAGGGCCAATACACCACTCAATGGAATGTCGTCATGGCCGGCAGTGTCGTCTCGATTATTCCGATCGCGGTCATTTATCTCCTGGCCCAGCGTCACATCATCGCCGGTATCGCACACACCGGCATCAAATAG
PROTEIN sequence
Length: 292
MPDTTVAAATLTPVPAAPSRPGRVARRAGLYVLVIACAVVMLFPFLWTVVTSLTPGGDLAGGPSLFVRNPTLDAYRTLIAAIPIWRIVINSLAIAIAATLCQLLTGSMAAYAFSRLQFRGKSVIFALYLATLMVPLEVLVVPLFIEMKKLGLQDSYFALLAPSIASAFGIFLVKQAMDAVPRELDEAATIDGGSHLRIYATIMIPLVRPALATLAVFAFMGSWNSFLWPLVVIHSPDRMTLPLGLSTLQGQYTTQWNVVMAGSVVSIIPIAVIYLLAQRHIIAGIAHTGIK*