ggKbase home page

scnpilot_solids2_trim150_scaffold_473_curated_4

Organism: solids_Actinobacteria_2

near complete RP 45 / 55 MC: 2 BSCG 45 / 51 MC: 1 ASCG 10 / 38
Location: 2775..3518

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Nocardiopsis valliformis RepID=UPI00034DAF30 similarity UNIREF
DB: UNIREF100
  • Identity: 46.2
  • Coverage: 169.0
  • Bit_score: 139
  • Evalue 3.30e-30
Transcriptional regulator {ECO:0000313|EMBL:EXG79754.1}; TaxID=927661 species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 52.3
  • Coverage: 155.0
  • Bit_score: 140
  • Evalue 3.60e-30
regulatory protein TetR similarity KEGG
DB: KEGG
  • Identity: 45.5
  • Coverage: 178.0
  • Bit_score: 138
  • Evalue 4.00e-30

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Cryptosporangium arvum → Cryptosporangium → Frankiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 744
GTGCCTAGGGCCGGCCTGAGCACGGCCGTGGTGGTGGGAACCGCCGCAGAGCTCGCCGATGAGGCCGGGTGGGACCAGCTGACGCTGGCGGCGGTGGCCGCCCGGCTCAGCGTGCGACAACCCAGCCTGTACAAGCACATCGGGTCGCTGGCGGAGCTGCGGAGGGCGGTCAGCGTACTGGCGGTGACGGAGATCGGCGACCGGCTGGTGGTCGCGGTGGCGGGCCGTTCGGGGGTAGATGCGCTGACGCATCTGGCGATCGCCTACCGCGGGTACGCTCACCGGCATCCCGGGCGCTATGCCGCCAGCGTCATCGCGCCGGCGCCTGGGGACCGCGAACACACTCGGGTCGCCGATGGTGTGCTCCGCACCCTCGCCGCGGTGCTGCGCGGATACGGCTTCCCCGACATCGCAGGGAATGTAGTCCGCGAAGTCGAGCGAGCCGGCGATGACGAGGTCGGCGCGCCTGGCGATGCTCCTGCGGGAGACACCATCGACGGTGGAAAGGGCGATGGCCCGGCGAGTGCTTCTCCGGCGGACACGCTGCACGCGATCCGAGGACTGCGTGCCATGCTGCACGGTTTCGTCGCGCTGGAGGCGGCCGGCGGCTTCGGCATGCCGCTCGATTTGGACGTGAGCTATCGGCGTCTGGTGGCCGGACTCGACGCAGCCCTCACCCGGCAAGGAGCGGGCGCTGGCCCATCCGGCGAGCATGACCGGGCCACCACCGTGGTCGGTCTATGA
PROTEIN sequence
Length: 248
VPRAGLSTAVVVGTAAELADEAGWDQLTLAAVAARLSVRQPSLYKHIGSLAELRRAVSVLAVTEIGDRLVVAVAGRSGVDALTHLAIAYRGYAHRHPGRYAASVIAPAPGDREHTRVADGVLRTLAAVLRGYGFPDIAGNVVREVERAGDDEVGAPGDAPAGDTIDGGKGDGPASASPADTLHAIRGLRAMLHGFVALEAAGGFGMPLDLDVSYRRLVAGLDAALTRQGAGAGPSGEHDRATTVVGL*