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scnpilot_solids2_trim150_scaffold_473_curated_23

Organism: solids_Actinobacteria_2

near complete RP 45 / 55 MC: 2 BSCG 45 / 51 MC: 1 ASCG 10 / 38
Location: 23613..24104

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Kribbella catacumbae RepID=UPI00037F2537 similarity UNIREF
DB: UNIREF100
  • Identity: 42.8
  • Coverage: 159.0
  • Bit_score: 117
  • Evalue 1.50e-23
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 41.4
  • Coverage: 162.0
  • Bit_score: 112
  • Evalue 1.20e-22
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ADB34382.1}; TaxID=479435 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Kribbella.;" source="Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 41.4
  • Coverage: 162.0
  • Bit_score: 112
  • Evalue 5.30e-22

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Taxonomy

Kribbella flavida → Kribbella → Propionibacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 492
ATGAGTCTGCCCGAGAACGACGGTTTCGACGAGTGGGTGGCCCCGCACCTGGCCGTCTTGACCGCGCTCGCCGCGCAACAGGTGCCGTCCGCGGACGTCGAAGACGTCGTCCAGGAGACGCTGGTGCGGGCGTGGCGGCGTCGCGCGACGTTCCGGCCGGAGCGCGGAACGGCTCGTGCTTGGCTGGTGGCCATCCTGTTGGACCGAGCCCGTCGGCACCGGACCCGGTCTCGGCCGGTCGAGCTGATCGGTCTGCGTCCCGACGACGACCCGGCAACCGGCAACTCCCCGGATCTGGCGGCGAGACATATGGACATCGATCGCGCGATCGCAGCGCTTCCCCGGCGGCAGCGTGAGGTGATCTGGCTGCACTACCTGGCGGACCTGTCCATGTCCGACATCGCCACCGTCCTCGGTATCTCCGCCGGGTCGGTCAAGACCCATTTGCACCTCGGGCGCAACGCCCTTCGCATCCGACTGGAGGCGACATGA
PROTEIN sequence
Length: 164
MSLPENDGFDEWVAPHLAVLTALAAQQVPSADVEDVVQETLVRAWRRRATFRPERGTARAWLVAILLDRARRHRTRSRPVELIGLRPDDDPATGNSPDLAARHMDIDRAIAALPRRQREVIWLHYLADLSMSDIATVLGISAGSVKTHLHLGRNALRIRLEAT*