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scnpilot_solids2_trim150_scaffold_201_curated_8

Organism: solids_Actinobacteria_2

near complete RP 45 / 55 MC: 2 BSCG 45 / 51 MC: 1 ASCG 10 / 38
Location: comp(10615..14127)

Top 3 Functional Annotations

Value Algorithm Source
TrwC relaxase n=1 Tax=Intrasporangium calvum (strain ATCC 23552 / DSM 43043 / JCM 3097 / NBRC 12989 / 7 KIP) RepID=E6SC41_INTC7 similarity UNIREF
DB: UNIREF100
  • Identity: 49.1
  • Coverage: 999.99
  • Bit_score: 958
  • Evalue 6.10e-276
Multifunctional conjugation protein TraI {ECO:0000313|EMBL:KJE76907.1}; TaxID=1121877 species="Bacteria; Actinobacteria; Acidimicrobiia; Acidimicrobiales; Acidimicrobiaceae; Ferrimicrobium.;" source="Ferrimicrobium acidiphilum DSM 19497.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 49.7
  • Coverage: 999.99
  • Bit_score: 1042
  • Evalue 0.0
TrwC relaxase similarity KEGG
DB: KEGG
  • Identity: 49.1
  • Coverage: 999.99
  • Bit_score: 958
  • Evalue 1.90e-276

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Taxonomy

Ferrimicrobium acidiphilum → Ferrimicrobium → Acidimicrobiales → Acidimicrobiia → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 3513
ATGCGCCTGGGGACCGGGTTCAAGTACCTGATGGAGTCGGTCGCTCGAGGCGACGGGGCAGCAGACCTGTCGTCACCGCTGACCCGCTACTACGCCGAATCCGGCACCCCACCGGGCCGTTTCCTGGGCGCCGGACTGGCCGGTGTGAACGGCGGACAGGGCATCGCCGAGGGCACGCAATGCACCGAGACGATGCTCTTTCACATGCTCGGCGAGGGCACGGATCCCATCACCGGCGAGCAGCTCGGCCGGGTCGCGAAGACGGGCGCAGTGGCCGGATTCGACCTGACATTCTCCGTCCCGAAGTCCATCTCCGTCGCGTGGGCGGTGGCCGATGCGGGCACCCAGGCGGTGATCTATCAGGCGCATCAGGACGCCATCAACCTGGCGATCAGGTACGCGGAGCGGAATGTGTTCTTCTCCCGCTCCGGCGTGCATGGCATCGTGCAGGAGCCGATCCGCGGCGTCCTCGCCGCAGCGTTCGATCACTGGGACTCCCGCACCGGTGACCCCCAATTGCATACGCATGTCGTCGTCCAAAACCGTGCCCAATCGCTGGACGGGACGTGGCGAACCCTGGACTCCCGCACCCTGTTCAAGCACGTCGTCACACTGTCCGCGCTGCACCAGGGCATCCTGCAAGACCTGCTCTCGGCACGCCTCGGATGGGGCTGGGACCCGCACCAACGGCGCCACAGCCACGCCCCGAAGTGGGAGGCCCGCGGCGTCGCCGACGAGCTGATGGCCGAATTCTCCACTCGCACAGAGCAGATCGAACGCGACGCCGACGCCGCCGTCCAGCGGTTCATCGACGCGTACGGCCGGCGGCCCACCGACGTGGAAGTGATGCGCATTCGCCAGATCGTCACCCTGCAAACCCGGCCGGACAAGCAGCACCGCTCCCTCGCCGAGCAGACGCAGGAATGGCGGGAACGTGCGCGGCCCTTTGTCGGTGAGGACACCGTCGCTTGGGTGGCAACGCTTCGGGACCGCAACGATCTGCCGGCGCTGCGATCCGACGACCTGCATGACGGCATCCTGACCGACCTCGCCCGCGTCACCCTCTGGGCGGTCGCGGACCGTCGGGCCACGTTCCACCGCGCGAACCTGCTCGCCGAGATCCACCGCCAACTGCACGGCATCCGGTTCGCCGATCCGGCCGAACGGATCACCGCCGGGGAGCGCACCGCCGACTTCGCCCAACAGCAGTGCACCCAACTCACCGTGCCCAGCAGACACTATGTACCCGCCAGCTTCCGCCGCCCGGACGGCGTCTCTAAGTTCACCGGCCAGGCCGCCACGATCTACACCACCGCTACTCTGTTGGACGCCGAATCCCGCCTGCTGGCCGCCGGACGCGCCACCACCGGACCGACCGTGTCCATCCAGACCGTCGCCGCCGTCGCGGACGCGCCCCTGGCGTCGAACGGGCGACTCATGTCGACCGATCAGGCCGTCGCCGTGGAGAAGATCGCCACCTCCGGGCGCGTGCTGGACGTACTCGTCGGGCCCGCCGGCACCGGTAAGACAGTCGCCATGGCCGCCCTACGAACCGCCTGGGAAACCGAACACGGCCCGGGCTCGGTGATCGGATTGGCCCCGTCCGCCGTAGCGGCGCAGGTCCTCGCCGACGACCTGGATATCGCCACCGAGAACACCGCCCGCTGGCTCACCGAAGCCCGCCGGGTACCCGACCTGGCCGCGACTATCGCCGAGCTGCAGCACAAGCTCGCCGACGCTGGCCACCCCGCGACCAGGCGACGCCTGCACGACCGTATCGCGCACCTCCGCGCCGAAACGAACCGCTGGCAGGTACATCCATCGCAGCTTGTGATCGTCGATGAGGCATCCCTTGCCGGCACCTTTGCCCTCGACGAACTGGTCAGCCAGGCGACCTATGCGGGCGGAAAGGTCGTACTGGTGGGGGACTGGGCACAACTGTCCGCGGTCCAGGCCGGCGGCGCCTTCGGCATGCTCGTCGCCGACCGTGAGCTCGCCCCGGAACTGACCGACGTCCGCCGCTTCCAAAACGCCTGGGAGAAGGCCGCCTCCGTCCGCCTCCGCATCGGCGACACCCGCGCCATCGACACCTACCTGCGACACGACCGCATCCAGTCCGGCACCCGTGACGAGGTCCTCGACGCCCTCTACACGGGGTGGAAGCACGACACCGACGCTGGCCAGACGTCGCTGATGATCGCCGGTGACGCGGACACCGTCGCCGACCTCAATCGCCGCGCCCGCGCCGACCGCATCGCCGCAGGGCAGGTCACCGAGGCCGGCCTAGACGTCATAGCGGGGGTCGCAGGCGTCGGCGATGTGGTCGTCACCCGCCGCAACGACCGCACCCTGACCACCGGACGCTCCTGGGTCAAGAACGGCGACCGCTGGACCGTCACCACCACCAACACGGACGGCTCCATGACCGTCCAGCGCGCCAGCGGCAGAGGGCGGGTCATGCTGCCCGCCGACTACGTCCGAGAACACGTCGAACTCGGTTACGCCTCCACCGCGCACCGCGCGCAGGGCCGCACCGTCGACACTGCACACGCCGCCGTCTCCGTGACCACCACCCGCGAGGTCCTGTATGTCGCCTCCACTCGCGGGAGGCAGTCCAACCGGCTGTACGTGGACCCCTACTACGACCCCGCCGCCGACACCTCGCACCTGCCCATCGAGCCGCAACCCGTCGAGGAGGTCCTCGCCCGGGTGCTGGGCAACGTCGGCGCCGACCTCGCTGCGCACACCATCGCGCACCGCGAACGGGAACACGCCGAGTCCATTGCCACGCTCGCTGATGAGTACCTGACAATCGCGCGCGAAGCCCAGGCCGGACGCTGGGACGAGCTGATTGCTCGGTCCGGGCTCACACCGGATCAGGTCCAGGCGGTGACGGAATCACCCGCTTATGGGCCTCTGCTGGCCGGGCTGCGCACCGCCGAATCCCGCGGACTGGACGTCAACGCTGCCCTTCCCGCGCTGGTCGCGCAGCGCACCCTTATTGGCGCCGAGGACGTCGCCGCAGTCCTGCACGAACGCATCGCCCGCTGGGCCACCACCGCGGGCGCCGACCGGGCGACCCGGAACCGCAGCATCGTCGGGCTCGTCGCCCGAGCCGATGGCGTCACCGACCCCGACATGCAGCGTGCTCTCGCCGAACGCGCCCAGGCGATGGAGCAGCGCGCGCAGGTCCTCGTCGACCGAGCCCTGGCGGCCCGCGAACCGTGGATCGCAGCTCTCGGCGCGCCGCCTGCCGATCCTCGGTCCGGCGCGGCCTGGGCGCACGAGGCACGCACCATCGCCGCGTTCCGCGAACTGCACAAGGTCGCCGGCGACACCCCCGCATCGCTGAACGATGGTGGCGGATCGCTCATGGCGCTTGGAGACGCCCGCGCTGCCATCGCCGCCTGGCACCGAGCCGAGGCCATCACCGTGGGGACCGACCGTCGGCCCTCGGGGGCACCATCAACGGTGACAGAGCCGGTCGCCGTCGCTCCCGTCATGGAGGTGTAG
PROTEIN sequence
Length: 1171
MRLGTGFKYLMESVARGDGAADLSSPLTRYYAESGTPPGRFLGAGLAGVNGGQGIAEGTQCTETMLFHMLGEGTDPITGEQLGRVAKTGAVAGFDLTFSVPKSISVAWAVADAGTQAVIYQAHQDAINLAIRYAERNVFFSRSGVHGIVQEPIRGVLAAAFDHWDSRTGDPQLHTHVVVQNRAQSLDGTWRTLDSRTLFKHVVTLSALHQGILQDLLSARLGWGWDPHQRRHSHAPKWEARGVADELMAEFSTRTEQIERDADAAVQRFIDAYGRRPTDVEVMRIRQIVTLQTRPDKQHRSLAEQTQEWRERARPFVGEDTVAWVATLRDRNDLPALRSDDLHDGILTDLARVTLWAVADRRATFHRANLLAEIHRQLHGIRFADPAERITAGERTADFAQQQCTQLTVPSRHYVPASFRRPDGVSKFTGQAATIYTTATLLDAESRLLAAGRATTGPTVSIQTVAAVADAPLASNGRLMSTDQAVAVEKIATSGRVLDVLVGPAGTGKTVAMAALRTAWETEHGPGSVIGLAPSAVAAQVLADDLDIATENTARWLTEARRVPDLAATIAELQHKLADAGHPATRRRLHDRIAHLRAETNRWQVHPSQLVIVDEASLAGTFALDELVSQATYAGGKVVLVGDWAQLSAVQAGGAFGMLVADRELAPELTDVRRFQNAWEKAASVRLRIGDTRAIDTYLRHDRIQSGTRDEVLDALYTGWKHDTDAGQTSLMIAGDADTVADLNRRARADRIAAGQVTEAGLDVIAGVAGVGDVVVTRRNDRTLTTGRSWVKNGDRWTVTTTNTDGSMTVQRASGRGRVMLPADYVREHVELGYASTAHRAQGRTVDTAHAAVSVTTTREVLYVASTRGRQSNRLYVDPYYDPAADTSHLPIEPQPVEEVLARVLGNVGADLAAHTIAHREREHAESIATLADEYLTIAREAQAGRWDELIARSGLTPDQVQAVTESPAYGPLLAGLRTAESRGLDVNAALPALVAQRTLIGAEDVAAVLHERIARWATTAGADRATRNRSIVGLVARADGVTDPDMQRALAERAQAMEQRAQVLVDRALAAREPWIAALGAPPADPRSGAAWAHEARTIAAFRELHKVAGDTPASLNDGGGSLMALGDARAAIAAWHRAEAITVGTDRRPSGAPSTVTEPVAVAPVMEV*