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scnpilot_solids2_trim150_scaffold_162_curated_17

Organism: solids_Actinobacteria_2

near complete RP 45 / 55 MC: 2 BSCG 45 / 51 MC: 1 ASCG 10 / 38
Location: 24673..25986

Top 3 Functional Annotations

Value Algorithm Source
ABC-type sugar transport system periplasmic component-like protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CSS8_PSEUX similarity UNIREF
DB: UNIREF100
  • Identity: 42.6
  • Coverage: 394.0
  • Bit_score: 321
  • Evalue 1.40e-84
sugar ABC transporter substrate-binding protein; K10439 ribose transport system substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 42.6
  • Coverage: 394.0
  • Bit_score: 321
  • Evalue 4.50e-85
ABC-type sugar transport system periplasmic component-like protein {ECO:0000313|EMBL:AEA24531.1}; Flags: Precursor;; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 42.6
  • Coverage: 394.0
  • Bit_score: 321
  • Evalue 2.00e-84

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Taxonomy

Pseudonocardia dioxanivorans → Pseudonocardia → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1314
ATGGCAAGATTCACCCCGAGGGCCCGAACGCTCGTTGCCGCAACCTGTCTGGTCACGGCGACCGTCTTGATTGCCGGCTGCTCCCAGTCCGGTGCAGGGACGTCAGCTGGCGCATCCAGTGCGAGCGCGCCGCCGGCATCCCCGCACAGTGCTGCGCAGGGCTCACCGTCTTCGCCTGCCGCAGAGTCCTCGACGGGCGCTTCCGAGCCAACTCCGAGCGGCAGCTCCGCCGACTCCTCCTCACCGACGACGACGCCGACCGGCGGCACGGACATTTCGGCCTACCTGAACGAGCCGACGTTCGTCAGCCCAGGGGCACCGTTCGACATCACCAAGGTCAAGGGCAAGAGCATCGCAGTGGTCCCCGCGACCAGCAACCAGTACGACAACACCATCCAGGCCGAGATGAAGACCCTGGCGGACAAGTACGGCGTCCACTACACCAACTATCCGAACCAGGGCCAACCGACTCAGTGGGCGTCGTCGCTCAACCAGGCGATCGCCACCAAACCCGATCTGATCATCCTCAATACCGCACTCGACCCCAGGCAGGTGCTGTCGCAGATCAAGGCGGCCAAGGCGCAGGGCATTCCGGTGATCGCCACCCACTTCTTCGACCAGGACCAGTCTGCCGCGCTCGGTACCAGTTGCGGGGGGCCGCAAGAACTGTGCGACGCCGGATTGACCGCAACCGTTAACGCCCCGTTCAATCTCGCCACTCGTGTCGAGGCGGATTGGATCGTCCAGGACTCGGGTGGGAAGGCCCACGTGATGGTCATCACCGCGGATGACGCGGCTCCCACAGCGGGCATGGTCCAGGCGGCCAAGGACGAGTTTGCCAAGAAGTGCCCCGCGTGCGTCGTCGACGTGCAGAACGTGCTGGTCAGCGACTGGCCCAGCAAGATTCCGACACTGGTGTCGACCGCCCTCACCCGCGATCCGGACCTGCACTACATTCTGCCGGTGTTCGATTTCGGCGCGCCCTACGCCGCCACCGGAATTGTCACCGCTGGAAAGTCCGGCCAGGTGAAGATAGTCAGCTACAACGGCACGCAGAGCGTGCTGCAGTTGCTGCAGAAGGGCGGCCCGATCGCGGTTGACGTGGGCGAGCCGCTGAACTGGCTGGCCTACGCCTTCATGGACCAGGCATTCAGGGTGCTGGCGGGGGTAGCTCCGGTGGCCGACGAACACTCTCCGATCCGGGTATTCACCAAGGACAACGTGGCCGATGCCGGCACTCCACCAACGGTCACCGGCGGATACGGCGACGCCTACATCGCCGGCTATCAGCAGCTGTGGCGCAACGGGTCGTGA
PROTEIN sequence
Length: 438
MARFTPRARTLVAATCLVTATVLIAGCSQSGAGTSAGASSASAPPASPHSAAQGSPSSPAAESSTGASEPTPSGSSADSSSPTTTPTGGTDISAYLNEPTFVSPGAPFDITKVKGKSIAVVPATSNQYDNTIQAEMKTLADKYGVHYTNYPNQGQPTQWASSLNQAIATKPDLIILNTALDPRQVLSQIKAAKAQGIPVIATHFFDQDQSAALGTSCGGPQELCDAGLTATVNAPFNLATRVEADWIVQDSGGKAHVMVITADDAAPTAGMVQAAKDEFAKKCPACVVDVQNVLVSDWPSKIPTLVSTALTRDPDLHYILPVFDFGAPYAATGIVTAGKSGQVKIVSYNGTQSVLQLLQKGGPIAVDVGEPLNWLAYAFMDQAFRVLAGVAPVADEHSPIRVFTKDNVADAGTPPTVTGGYGDAYIAGYQQLWRNGS*