ggKbase home page

scnpilot_solids2_trim150_scaffold_162_curated_27

Organism: solids_Actinobacteria_2

near complete RP 45 / 55 MC: 2 BSCG 45 / 51 MC: 1 ASCG 10 / 38
Location: comp(38060..38932)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Amycolatopsis benzoatilytica RepID=UPI0003627CB9 similarity UNIREF
DB: UNIREF100
  • Identity: 51.2
  • Coverage: 283.0
  • Bit_score: 253
  • Evalue 2.40e-64
Squalene synthase HpnC {ECO:0000313|EMBL:EWT07895.1}; TaxID=584657 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium chromatireducens Q5-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 53.8
  • Coverage: 264.0
  • Bit_score: 257
  • Evalue 1.80e-65
squalene synthase similarity KEGG
DB: KEGG
  • Identity: 49.2
  • Coverage: 262.0
  • Bit_score: 238
  • Evalue 1.90e-60

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Intrasporangium chromatireducens → Intrasporangium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 873
GTGATGGGGGTGACGGGATTCACCGAAACGGCCGCGCCGGAACTTCGGCTGCCGGATGCCCCGCGCAAGCGGATCGACGGGGAGAACTTTCCGGTGGCGCTGCGGCTGCTGCCGGCTCGGGTGCGGCGCGGACTGCTGGCGCTGTACGCCTACGCCCGGTACGTCGACGACATCGGCGACGAGTTCGACGGTCCGCGGATCCGGGCCCTGGAGCAGATTCGGGCGCAGGTCGAGGTGCTCTACGACGGCGGGCGGCCTGAGCTGCCTGCGGTCGCCGGGCTGGCGGTGCTGCGCGAGGAGTTCCGGGTTCCGGCCCAGCCGTTCCTGGACCTGGTGCAGGCGAATCTGGCCGACCAGCAGGTGTTTCGATATGCCACGTTCCCCGACTTGCTCGACTACTGCCGGCTGTCGGCGAGCCCGGTGGGCCGGGTGGTGCTGCGCATCATCGGAGCTGGCGCCGAGCATCTGGCCGAACTGTCCGACCGGATCTGCACGGGCCTGCAGATCGTCGAGCACCTGCAGGATGTCGGCGAGGATTTCCGGGCCGGCCGGGTGTACCTGCCCGGGGCGGACATGGCCAGGTTCCAGGTCACCGAGCCGATGCTGGCCCAGCGCACCGCGCCGGCGCCCGTTCGCGAGTTGGTCCGCTACGAGTTGGACCGGGCCTCGGCCTACCTGGAGGCAGGCTCTCCTTTGGTATCCGCCCTGCGCGGGCCCGGCCGGCTGGCGGTCGCCGGTTTCCTGGCCGGCGGTCGAGCGGCCGTGCGGGCGGTCCGGGCGGCCGAGTACGACGTGCTGGGTGTCGACTGCTCCCCGTCGAAGCGCGGGCTGCTGGTCGCCCTTCTCCGCTCGACCGTGCGGACCGCCGGATGA
PROTEIN sequence
Length: 291
VMGVTGFTETAAPELRLPDAPRKRIDGENFPVALRLLPARVRRGLLALYAYARYVDDIGDEFDGPRIRALEQIRAQVEVLYDGGRPELPAVAGLAVLREEFRVPAQPFLDLVQANLADQQVFRYATFPDLLDYCRLSASPVGRVVLRIIGAGAEHLAELSDRICTGLQIVEHLQDVGEDFRAGRVYLPGADMARFQVTEPMLAQRTAPAPVRELVRYELDRASAYLEAGSPLVSALRGPGRLAVAGFLAGGRAAVRAVRAAEYDVLGVDCSPSKRGLLVALLRSTVRTAG*