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scnpilot_solids2_trim150_scaffold_1464_curated_1

Organism: solids_Actinobacteria_2

near complete RP 45 / 55 MC: 2 BSCG 45 / 51 MC: 1 ASCG 10 / 38
Location: 2..727

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XAQ2_NAKMY similarity UNIREF
DB: UNIREF100
  • Identity: 60.2
  • Coverage: 231.0
  • Bit_score: 262
  • Evalue 4.30e-67
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 60.2
  • Coverage: 231.0
  • Bit_score: 262
  • Evalue 1.40e-67
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ACV79305.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 60.2
  • Coverage: 231.0
  • Bit_score: 262
  • Evalue 6.10e-67

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Taxonomy

Nakamurella multipartita → Nakamurella → Nakamurellales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 726
GTGAGGCAGGACCGTCGGCGCGAAGCGTCAGGTCCGGTGAACGGAGCGCCGAACGAACCATTCGGCACTCTCCACGAGGCGGCAGCGGACGCGGCGAGGCAGTCATCGCCGGGCCAGGACCAGCGGGAGTTGCCGCGGCAGCGCTCCGACCAGGACGCCCCACGGCCCACCGTTGGGGACCTGGTCGACCAGGCGGCCGACGCGTTTGTCGAGTATCGGCAGGGCGTGCCTGGCGCGATCGACCGGCTGGTGCGGCTGGTCACGCCACTTTTGTGGCACACCGCCCGGCACTGCGGGCTGAGCGCGGCGGAGGCGGAGGACGCCGTGCAGCATGCGTTCCTGACCCTGGTCCGCCGGGCGGACTCGATCGCCGATCCGCGTGCCGTGGTGCGCTGGCTGACCGTGACCCTGCGCCGGCAGGCCTGGCGCGACCGGGCCGCCGCCTCCGCCGCATCCGGCGGCGAGCCCACCGAGCAGGACCTGGCACCGGTGCCGTCGGCCGAGTCGCTGGCGCTGCTCTCGGACCAGCGACAACGCTTGTGGGAACACGTGCAGGCGTTGCCGCCGCGGTGCCGCCGGCTGATCGCCGTCATCGCCTTCTCGCCCCGCCCCGATTACGCCGCACTCGCCGCCGATCTCGGGATGCCGGTCGGCTCCATAGGACCCACCCGTGGCCGTTGCCTGGCCAAACTCCGCGCCCGCCTGCAGGGAGAGGAATCGGCATGA
PROTEIN sequence
Length: 242
VRQDRRREASGPVNGAPNEPFGTLHEAAADAARQSSPGQDQRELPRQRSDQDAPRPTVGDLVDQAADAFVEYRQGVPGAIDRLVRLVTPLLWHTARHCGLSAAEAEDAVQHAFLTLVRRADSIADPRAVVRWLTVTLRRQAWRDRAAASAASGGEPTEQDLAPVPSAESLALLSDQRQRLWEHVQALPPRCRRLIAVIAFSPRPDYAALAADLGMPVGSIGPTRGRCLAKLRARLQGEESA*