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scnpilot_solids2_trim150_scaffold_335_curated_34

Organism: solids_Actinobacteria_2

near complete RP 45 / 55 MC: 2 BSCG 45 / 51 MC: 1 ASCG 10 / 38
Location: comp(37323..38165)

Top 3 Functional Annotations

Value Algorithm Source
Lysine decarboxylase n=1 Tax=Amycolatopsis vancoresmycina DSM 44592 RepID=R1G1J8_9PSEU similarity UNIREF
DB: UNIREF100
  • Identity: 80.5
  • Coverage: 241.0
  • Bit_score: 406
  • Evalue 2.20e-110
DNA-binding protein {ECO:0000313|EMBL:KDN22558.1}; TaxID=287986 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis rifamycinica.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.9
  • Coverage: 241.0
  • Bit_score: 408
  • Evalue 6.10e-111
lysine decarboxylase similarity KEGG
DB: KEGG
  • Identity: 80.9
  • Coverage: 241.0
  • Bit_score: 405
  • Evalue 1.20e-110

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Taxonomy

Amycolatopsis rifamycinica → Amycolatopsis → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 843
GTGACAGAGCGGGAACGACAGAGCAACGACGGGCCGGCCGGCCACGCCGAGAGCGGCGCCGACGAGGGTGACGACACCCTGCTGCAGGGCCGCGTTCGGGGGCGCACCTTCGGCGGCGTCCAGGGGCCGGTGGTCCGGCGCGGCCGACAGCAGCAGGAGACCACCACCGACCAGCGACTGTTGGACTCTCGCGGGCCCACCGATTGGGTGCACACCGATCCGTGGCGGGTGATGCGCATCCAGTCGGAGTTCGTGGAGGGGTTCGGTGCGTTGTCCGAACTGCCCCGGGCGGTGACGGTGTTCGGCAGTGCCCGCACCCAGCGGGACTCGGCCACCTATCGACTCGGCCGGGAGATCGGCGCCGCGCTGGCCCGGGAGGGTTTCGCTGTGATCACCGGCGGCGGGCCGGGCACCATGGAGGCCGCCAACCGCGGCGCCAACGAGGCCGGCGGGCTGTCGGTCGGACTGGGCATCGAGTTGCCGTTCGAGCAGGGCCTGAACCAGTGGGTGGACCTGGGCATCAACTTCCGGTACTTCTTTGCCCGCAAGATGATGTTCATTAAGTACTCGCAGGGCTTCGTGTGCCTTCCGGGCGGGTTCGGCACCCTGGACGAGCTGACCGAGGCGCTGACGCTGGTGCAGACCAAGAAGGTCACCAAGTTCCCTGTGGTGCTGTTCGGATCGTCCTACTGGGGCGGACTGGTGGACTGGATCAAGGGCACCATCCTGGCCGAGGGCAACATCTCGCCGGGGGACATGGACCTGCTGTACGTCACCGACTCGATCGACGACATGATCCGCGTGGTGCACGAGTCCTACCAGGCGTGGGAGGACGCGCACTGA
PROTEIN sequence
Length: 281
VTERERQSNDGPAGHAESGADEGDDTLLQGRVRGRTFGGVQGPVVRRGRQQQETTTDQRLLDSRGPTDWVHTDPWRVMRIQSEFVEGFGALSELPRAVTVFGSARTQRDSATYRLGREIGAALAREGFAVITGGGPGTMEAANRGANEAGGLSVGLGIELPFEQGLNQWVDLGINFRYFFARKMMFIKYSQGFVCLPGGFGTLDELTEALTLVQTKKVTKFPVVLFGSSYWGGLVDWIKGTILAEGNISPGDMDLLYVTDSIDDMIRVVHESYQAWEDAH*