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scnpilot_solids2_trim150_scaffold_808_curated_1

Organism: solids_Actinobacteria_2

near complete RP 45 / 55 MC: 2 BSCG 45 / 51 MC: 1 ASCG 10 / 38
Location: 3..272

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator WhiB n=1 Tax=Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 / NCIMB 10081) RepID=D1A8C3_THECD similarity UNIREF
DB: UNIREF100
  • Identity: 64.4
  • Coverage: 87.0
  • Bit_score: 123
  • Evalue 8.90e-26
transcription factor WhiB similarity KEGG
DB: KEGG
  • Identity: 64.4
  • Coverage: 87.0
  • Bit_score: 123
  • Evalue 2.80e-26
Transcriptional regulator WhiB {ECO:0000256|HAMAP-Rule:MF_01479}; TaxID=471852 species="Bacteria; Actinobacteria; Streptosporangiales; Thermomonosporaceae; Thermomonospora.;" source="Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 /; NCIMB 10081).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 64.4
  • Coverage: 87.0
  • Bit_score: 123
  • Evalue 1.30e-25

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Taxonomy

Thermomonospora curvata → Thermomonospora → Streptosporangiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 270
GCCGCCGAGGCGATCTGCGCCGACGGTGATCTGGACCGGTTGTTCGTCACCGGTGCGGCGCAGCGGGAGGCGGCCAAGCTGTGCCGCGACTGCCCGGTGCAGATGGAGTGCCTGGCCGACGCACTGGACAACCAGGTGGAGTTCGGCGTGTGGGGCGGGCTGACCGAGCGGCAGCGCCGCGCGCTGCTCAAGCGTCGCCCGGACGTGGCCAGCTGGCGTGTGGTGCTGGAACGGGCTCGAGACGAGGCCCGCCGGGGTGTGGCGAGCTGA
PROTEIN sequence
Length: 90
AAEAICADGDLDRLFVTGAAQREAAKLCRDCPVQMECLADALDNQVEFGVWGGLTERQRRALLKRRPDVASWRVVLERARDEARRGVAS*