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scnpilot_solids2_trim150_scaffold_808_curated_13

Organism: solids_Actinobacteria_2

near complete RP 45 / 55 MC: 2 BSCG 45 / 51 MC: 1 ASCG 10 / 38
Location: comp(10011..10340)

Top 3 Functional Annotations

Value Algorithm Source
PadR family transcriptional regulator n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B5DB6C similarity UNIREF
DB: UNIREF100
  • Identity: 85.3
  • Coverage: 109.0
  • Bit_score: 194
  • Evalue 5.00e-47
PadR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 84.4
  • Coverage: 109.0
  • Bit_score: 190
  • Evalue 2.30e-46
Transcriptional regulator, PadR family {ECO:0000313|EMBL:ACZ91489.1}; TaxID=479432 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 /; NI 9100).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.4
  • Coverage: 109.0
  • Bit_score: 190
  • Evalue 1.00e-45

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Taxonomy

Streptosporangium roseum → Streptosporangium → Streptosporangiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 330
ATGGGCAAGCAGTCCACGGAGATGCTCAAGGGGGTCCTGGAAGGCATCGTGCTGGCGATCCTGGCCACCCGCCGTGCCTACGGATACGAGATCACCGCCTGGCTGCGGGAACAGGGCTTCGCCGACATCGCCGAAGGCACCATCTACGCGCTGCTGCTGCGCATCGAGCAGCGCGGACTGGTCGACGTGACGAAGGTCCCCTCAGAAAAGGGGCCACCGCGCAAGGTCTACGCGCTCAACGCGCAAGGGCAGCAGTACCTCACCGAGTTCTGGAGGACCTGGAGCTTCCTCACAGAACGCCTCGAACAGCTCCACCAAGGTGGTAAGTGA
PROTEIN sequence
Length: 110
MGKQSTEMLKGVLEGIVLAILATRRAYGYEITAWLREQGFADIAEGTIYALLLRIEQRGLVDVTKVPSEKGPPRKVYALNAQGQQYLTEFWRTWSFLTERLEQLHQGGK*