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scnpilot_solids2_trim150_scaffold_259_curated_19

Organism: solids_Actinobacteria_2

near complete RP 45 / 55 MC: 2 BSCG 45 / 51 MC: 1 ASCG 10 / 38
Location: comp(24086..24298)

Top 3 Functional Annotations

Value Algorithm Source
CopG domain protein DNA-binding domain protein n=1 Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2SCI1_GEOOG similarity UNIREF
DB: UNIREF100
  • Identity: 45.5
  • Coverage: 66.0
  • Bit_score: 54
  • Evalue 4.00e-05
CopG family transcriptional regulator {ECO:0000313|EMBL:KGH45678.1}; TaxID=1522368 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter sp. KNN45-2b.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 45.5
  • Coverage: 66.0
  • Bit_score: 57
  • Evalue 1.10e-05
CopG domain-containing protein DNA-binding domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 45.5
  • Coverage: 66.0
  • Bit_score: 54
  • Evalue 1.30e-05

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Taxonomy

Modestobacter sp. KNN45-2b → Modestobacter → Geodermatophilales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 213
ATGGCTCTCATGGCGATGACACTGCGACTGGACGACGAGCTTGACGCCGAGCTGACGGCGCTGGCGAAGGCCGAGCACTTGAGCAAGCAGCAGGTAGCTGGGCGGGCGCTCCGTGAGTATCTGGATCGGAATCGGCGCACAGCGCGGACGTTGTCCAACGCCGAGCGGGTGATCGGCGAGAATGCACGGCTGATCCAACGACTGGGTGAGTGA
PROTEIN sequence
Length: 71
MALMAMTLRLDDELDAELTALAKAEHLSKQQVAGRALREYLDRNRRTARTLSNAERVIGENARLIQRLGE*