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scnpilot_solids2_trim150_scaffold_3399_curated_7

Organism: solids_Actinobacteria_2

near complete RP 45 / 55 MC: 2 BSCG 45 / 51 MC: 1 ASCG 10 / 38
Location: 4806..5267

Top 3 Functional Annotations

Value Algorithm Source
AraC family transcriptional regulator n=1 Tax=Humibacter albus RepID=UPI0003B474A7 similarity UNIREF
DB: UNIREF100
  • Identity: 85.1
  • Coverage: 134.0
  • Bit_score: 223
  • Evalue 1.10e-55
Transcriptional regulator, AraC {ECO:0000313|EMBL:AJW38454.1}; TaxID=1564114 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus sp. B7740.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 79.2
  • Coverage: 130.0
  • Bit_score: 210
  • Evalue 2.30e-51
AraC family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 80.2
  • Coverage: 131.0
  • Bit_score: 204
  • Evalue 2.80e-50

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Taxonomy

Rhodococcus sp. B7740 → Rhodococcus → Corynebacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 462
GTGCAGCACCCCGTGCTGCACGGGACTGCCGTCACCGCCAACCGGCACAATGATCGGATGGCCGCTGACCTGGACGAGCTGCGCCGGCTGCGCCGGGCACGGGATCGGATGGACCGGGAGTACGCCGAGCCGCTGGACGTGCCCGCACTGGCCCGCACCGCCCTGATGTCGGCCGCGCACTTTTCCCGTCGGTTCCGCGAGGTCTACTCCGAGACGCCCTACTCGTACCTGATGACCAGGCGGATCGAGCGGGCGCAGGCGTTGCTGCGACGCGGCGACCTGTCGGTGACCGACGTGTGCTTCGCTGTGGGCTGCACCAGCCTGGGGTCGTTCTCCTCCCGGTTCACCGAGCTGGTGGGCGAATCGCCGTCCGCGTATCGGGCTCGCGACCACAGCGACCTGCGCGAGACGGCCCCCTGCTACGCCATGCTGGTGACCAGGCCACCGCGCCGACGCGAGTAG
PROTEIN sequence
Length: 154
VQHPVLHGTAVTANRHNDRMAADLDELRRLRRARDRMDREYAEPLDVPALARTALMSAAHFSRRFREVYSETPYSYLMTRRIERAQALLRRGDLSVTDVCFAVGCTSLGSFSSRFTELVGESPSAYRARDHSDLRETAPCYAMLVTRPPRRRE*