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scnpilot_solids2_trim150_scaffold_5289_curated_4

Organism: solids_Actinobacteria_2

near complete RP 45 / 55 MC: 2 BSCG 45 / 51 MC: 1 ASCG 10 / 38
Location: comp(2981..3451)

Top 3 Functional Annotations

Value Algorithm Source
HTH-type transcriptional activator rhaS n=1 Tax=Actinoplanes sp. (strain ATCC 31044 / CBS 674.73 / SE50/110) RepID=G8SG29_ACTS5 similarity UNIREF
DB: UNIREF100
  • Identity: 81.2
  • Coverage: 138.0
  • Bit_score: 227
  • Evalue 7.70e-57
HTH-type transcriptional activator rhaS similarity KEGG
DB: KEGG
  • Identity: 81.2
  • Coverage: 138.0
  • Bit_score: 227
  • Evalue 2.40e-57
HTH-type transcriptional activator rhaS {ECO:0000313|EMBL:AEV82936.1}; TaxID=134676 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes sp. (strain ATCC 31044 / CBS 674.73 / SE50/110).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.2
  • Coverage: 138.0
  • Bit_score: 227
  • Evalue 1.10e-56

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Taxonomy

Actinoplanes sp. SE50/110 → Actinoplanes → Micromonosporales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 471
ATGAGTTCGCAGAAACCCGCGCATAGCGCGGAGAAGTGCGAACTCGACCGGAAGCGGCTCGAAGATCTGGCGCGGCTGCGGCAGGTGCGGGACCGGATCGACCGGGAGTACGCGCGGCCGCTGAACGTCGAGGCGCTCGCGGCGGGCGTCCACATGTCCTCCGGGCACCTCAGCCGCCAGTTCCGCGAGGCCTTCGGCGAGTCGCCCTACAGCTACCTGATGACGCGCCGGATCGAGCGGGCGATGGCGCTGCTGCGCCGCGGCGACCTCAACGTCACCGAGGTCTGCTTCGAGGTCGGCTGCTCCTCGCTCGGCACCTTCAGCACCCGCTTCTCCGAACTGGTCGGGATGTCGCCGAGCGAGTACCGCCGCGAGGAGGCAGGCGCGGTCGACGGGATGGACTCCTGCGTCGCCAAAGTCGTGACCCGACCGATCAGAAATCGAGAAGCGCGCACCGCCGGCCCCGCCTAA
PROTEIN sequence
Length: 157
MSSQKPAHSAEKCELDRKRLEDLARLRQVRDRIDREYARPLNVEALAAGVHMSSGHLSRQFREAFGESPYSYLMTRRIERAMALLRRGDLNVTEVCFEVGCSSLGTFSTRFSELVGMSPSEYRREEAGAVDGMDSCVAKVVTRPIRNREARTAGPA*