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scnpilot_solids2_trim150_scaffold_213_curated_7

Organism: solids_Actinobacteria_2

near complete RP 45 / 55 MC: 2 BSCG 45 / 51 MC: 1 ASCG 10 / 38
Location: 4793..6004

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor SigA n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XG60_NAKMY similarity UNIREF
DB: UNIREF100
  • Identity: 81.9
  • Coverage: 421.0
  • Bit_score: 647
  • Evalue 8.00e-183
RpoD subfamily RNA polymerase sigma-70 subunit; K03086 RNA polymerase primary sigma factor similarity KEGG
DB: KEGG
  • Identity: 81.9
  • Coverage: 421.0
  • Bit_score: 647
  • Evalue 2.50e-183
RNA polymerase sigma factor SigA {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.9
  • Coverage: 421.0
  • Bit_score: 647
  • Evalue 1.10e-182

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Taxonomy

Nakamurella multipartita → Nakamurella → Nakamurellales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1212
ATGGGGGACGGCGCGACCGACGGCCCCGACCTCGATGTCGATGCCGACGACGCCGAGATCGGTGATGTCGATGTCGATCTGGCGGACGCCGACGACGTCGACATCGACCCCACAGACGAGGCGGCCGACGACACCGACGGTGACGAATCCGATGAAACCGACGACGCCGAGCCGGCGGGTGCCGCCAAGCCCGCGGTCAAGACCAAGGACGGCGAGTCGGACGAGTTCACCTGGGACGACGAGGAGGAGTCCGAGGCGCTCAAGCAGGCGCGCAAGGATGCCGAGCTCACCGCCTCCGCCGACTCGGTCCGGGCCTACCTGAAGCAGATCGGCAAGGTCGCGCTGCTCAATGCCGAGGAAGAGGTGGACCTCGCCAAGCGGATCGAAGGCGGCCTGTATGCGGTGGAACGGCTGCGGCACTACGCCGAGGCCGGCGAGAAGCTGGCCACCCAGCTCCGCCGCGATCTGAACTGGGTCAAGCGGGACGGCGAGCGCGCCAAGAACCACCTGCTGGAGGCGAACCTGCGGCTGGTGGTGTCGCTGGCCAAGCGCTACACCGGGCGTGGCATGGCGTTCCTAGACCTGATCCAGGAGGGCAACCTCGGCCTGATCCGCGCCGTGGAGAAGTTCGACTACACCAAGGGCTACAAGTTCTCCACCTACGCCACCTGGTGGATCCGGCAGGCGATCACCCGGGCCATGGCCGACCAGGCGCGCACCATCCGCATCCCGGTGCACATGGTCGAGGTGATCAACAAGCTGGGCCGGATCCAGCGCGAGCTGCTGCAGGATCTGGGCCGCGAACCGACGCCGGACGAGCTGGCCAAGGAGATGGACATCACCCCGGACAAGGTGCTGGAGATCCAGCAGTACGCCCGGGAGCCGATCAGCCTGGACCAAACCATCGGCGACGAGGGCGACTCGCAACTGGGCGACTTCATCGAGGACTCCGAGGCCGTGGTGGCCGTGGACGCCGTGTCGTTCACGCTGCTGCAGGACCAGCTGCAGTCGGTGTTGCAGACGCTGTCCGAGCGGGAGGCCGGCGTGGTACGACTGCGCTTCGGACTCACCGACGGCCAGCCCCGGACGCTGGACGAGATCGGTCAGGTCTACGGAGTGACCCGGGAGCGGATCCGGCAGATCGAGTCCAAGACGATGTCCAAGCTGCGCCACCCGTCCCGCTCGCAGGTCCTGCGCGACTACCTGGAGTAG
PROTEIN sequence
Length: 404
MGDGATDGPDLDVDADDAEIGDVDVDLADADDVDIDPTDEAADDTDGDESDETDDAEPAGAAKPAVKTKDGESDEFTWDDEEESEALKQARKDAELTASADSVRAYLKQIGKVALLNAEEEVDLAKRIEGGLYAVERLRHYAEAGEKLATQLRRDLNWVKRDGERAKNHLLEANLRLVVSLAKRYTGRGMAFLDLIQEGNLGLIRAVEKFDYTKGYKFSTYATWWIRQAITRAMADQARTIRIPVHMVEVINKLGRIQRELLQDLGREPTPDELAKEMDITPDKVLEIQQYAREPISLDQTIGDEGDSQLGDFIEDSEAVVAVDAVSFTLLQDQLQSVLQTLSEREAGVVRLRFGLTDGQPRTLDEIGQVYGVTRERIRQIESKTMSKLRHPSRSQVLRDYLE*