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scnpilot_solids2_trim150_scaffold_2228_curated_2

Organism: solids_Actinobacteria_2

near complete RP 45 / 55 MC: 2 BSCG 45 / 51 MC: 1 ASCG 10 / 38
Location: 519..1157

Top 3 Functional Annotations

Value Algorithm Source
Sigma 54 modulation protein/ribosomal protein S30EA n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XEB0_NAKMY similarity UNIREF
DB: UNIREF100
  • Identity: 62.5
  • Coverage: 224.0
  • Bit_score: 267
  • Evalue 1.50e-68
sigma 54 modulation protein/30S ribosomal protein S30EA similarity KEGG
DB: KEGG
  • Identity: 62.5
  • Coverage: 224.0
  • Bit_score: 267
  • Evalue 4.90e-69
Sigma 54 modulation protein/ribosomal protein S30EA {ECO:0000313|EMBL:ACV77768.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 62.5
  • Coverage: 224.0
  • Bit_score: 267
  • Evalue 2.20e-68

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Taxonomy

Nakamurella multipartita → Nakamurella → Nakamurellales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 639
GTGGACATCGTCGTCAAGGGCCGAAACGTCGAAGTGCCCGAGCATTTCCGGGTGCACGTCTCGGAGAAGCTGGCGCGAACCGAGCGCTACGACCCCAAGATGGCGCACGTCGACGTCGAGCTGTCCCACGAGAGCAATCCGCGGCAGGCCAAGAACCGGCAGCGGGTGCAGATCACCGTCGTGGGCCGGGGGCCGGCGGTGCGCGCGGAGGCGGCCGCGGAGTCGTTCTATGCGGCGCTGGACCTGGCGGTGGACAAGCTGGACACCCGGCTGCGCAAGGTACGCGGTCGCCGGCTGGACCGCGTCACCTCCCGGGCCCCGCTGGCGGCGGTCGCGGCCGGTGCGGTGCCCGGTGGCCCGGAGCCGCTCTCCGGGATCTGGGGCGAAGGGCCCGATCAGCTCGGCGATTCGGCGCGCGATGGCGATGCCAGTTCCGCCGTCGGCGGCGACGACGAGGGCCCCGGCCGGGTGGTGCGCATCAAGGACCACCCCGCCGAACCCATGACGGTCGACCAGGCGCTGCTGCGGATGGAGCTGGTCGGGCACGACTTCTACCTGTTCAACGACGCCGACTCGGGCAAGGCCAGCGTGGTCTACCGGCGCAAGGGCTTCGACTACGGTCTGTTGCGGCTGTCCTGA
PROTEIN sequence
Length: 213
VDIVVKGRNVEVPEHFRVHVSEKLARTERYDPKMAHVDVELSHESNPRQAKNRQRVQITVVGRGPAVRAEAAAESFYAALDLAVDKLDTRLRKVRGRRLDRVTSRAPLAAVAAGAVPGGPEPLSGIWGEGPDQLGDSARDGDASSAVGGDDEGPGRVVRIKDHPAEPMTVDQALLRMELVGHDFYLFNDADSGKASVVYRRKGFDYGLLRLS*