ggKbase home page

You do not have permission to do that.

Please email help@ggkbase.berkeley.edu for help.

scnpilot_solids2_trim150_scaffold_1918_curated_11

Organism: solids_Actinobacteria_3

near complete RP 48 / 55 MC: 1 BSCG 50 / 51 ASCG 9 / 38
Location: comp(10878..12029)

Top 3 Functional Annotations

Value Algorithm Source
LacY proton/sugar symporter n=1 Tax=Streptococcus sp. oral taxon 056 str. F0418 RepID=F9HG34_9STRE similarity UNIREF
DB: UNIREF100
  • Identity: 29.5
  • Coverage: 383.0
  • Bit_score: 155
  • Evalue 9.10e-35
Arabinose efflux permease {ECO:0000313|EMBL:AHY47172.1}; TaxID=42256 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter radiotolerans.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 36.4
  • Coverage: 371.0
  • Bit_score: 237
  • Evalue 3.30e-59
major facilitator superfamily protein similarity KEGG
DB: KEGG
  • Identity: 30.4
  • Coverage: 369.0
  • Bit_score: 149
  • Evalue 1.60e-33

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rubrobacter radiotolerans → Rubrobacter → Rubrobacterales → Rubrobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1152
ATGCGCCGTCTTCTCGTGCTCGCCTCGGCGATGGTCTTCCTCGACCTGACCTTCTTTACGGCCATCGCGCCGCTGTTGCCGGAATACGTCGACGACCTCCATATGTCGACGGCGCAGGCTGGGATCCTGTCGGCCGCGTACGCGGCCGGGACGCTGGCGGCGTCGCTGCCGGGCGGGTACCTGGCCAGCCGCTTCGGGCCGCGGCGGACGGTGATCATCGGGCTCTGCGGGCTCGGCGTCGCCAGCCTCCTCTTCGGCCTCCTGGACTCGCCCTGGCCGCTCGACGCGGCGCGCTTCATCCAGGGCATCGCGGGCGCGCTGATCTGGTCCGGCGCGCTGACCTGGCTGATCAACAGCTACCCGGAGGACCAGCGCGGCCAGGTGATCGGCACCGCGCTCGGCACCGCGGTGGCGGGGTCGCTGATCGGCCCGGCGCTCGGCGCCCTCGCGGGCTCGGTCGGCACCGAGCCGGTCTTCGCCGCCGTCCTCGTCGTCTCCCTGGTGCTCGCCTACCTCGCCTCGCGCCTCCCCGACACGATGGTGCGGGAGAACCAGCCGCTGCGCGAGGTCTTCCGCTGCCTCGTCGACCGGCCGCTGGTCGAGGCGGCGATCTTCGTCAGCTCCCCGTCGCTGATGTTCGGCGCGATCGACGTGTTGCTGCCGCTACGGGTCGACGCCCTCGGCGGCGGCCACGCGCTGATCGCGGTCGGCTTCATCGGCGGCGCCGCGATCGAGTCGGTGCTGGCGCCGCTTGCCGGGCGCATGTCGGACCGGATCGGGCGGCGCGCGCCCTACATCCTCGGCATGGCGATCTGCACGGTGGCGATGGTCTTCTACGCGTTCGCCGACTCGCTGGCGACCGTGATCGCCTCCCTGCTCCTCACCTCGCTCGGCTCCGGCTTCTGCTTCGCCCCCGCGATGACGCTGATCTCCGACGCCGCCGAGGCGAGCGGCCTCCACCAGGGCTACGCGGTCGCCGTCACCAACATCGCGTGGGCGGCGGCGCAGGTGCTGGGCGGGGTCGCCGGGGCGGCGGTCGCCGGGGTGACCGGGGACGGCGCGCCCGCGATCGCCATCGCCGTCATCCTCGTGCTGACGATCCTCTACGCGTTCCGCTCCCTCGGGCCGGAGCCGGTCGCCGCGGAGGGATAA
PROTEIN sequence
Length: 384
MRRLLVLASAMVFLDLTFFTAIAPLLPEYVDDLHMSTAQAGILSAAYAAGTLAASLPGGYLASRFGPRRTVIIGLCGLGVASLLFGLLDSPWPLDAARFIQGIAGALIWSGALTWLINSYPEDQRGQVIGTALGTAVAGSLIGPALGALAGSVGTEPVFAAVLVVSLVLAYLASRLPDTMVRENQPLREVFRCLVDRPLVEAAIFVSSPSLMFGAIDVLLPLRVDALGGGHALIAVGFIGGAAIESVLAPLAGRMSDRIGRRAPYILGMAICTVAMVFYAFADSLATVIASLLLTSLGSGFCFAPAMTLISDAAEASGLHQGYAVAVTNIAWAAAQVLGGVAGAAVAGVTGDGAPAIAIAVILVLTILYAFRSLGPEPVAAEG*