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scnpilot_solids2_trim150_scaffold_3505_curated_7

Organism: solids_Actinobacteria_3

near complete RP 48 / 55 MC: 1 BSCG 50 / 51 ASCG 9 / 38
Location: comp(4283..4942)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Sporichthya polymorpha RepID=UPI000377F650 similarity UNIREF
DB: UNIREF100
  • Identity: 46.5
  • Coverage: 213.0
  • Bit_score: 181
  • Evalue 8.80e-43
RNA polymerase sigma-70 factor similarity KEGG
DB: KEGG
  • Identity: 48.5
  • Coverage: 202.0
  • Bit_score: 173
  • Evalue 7.60e-41
RNA polymerase sigma-70 factor {ECO:0000313|EMBL:AGL18044.1}; TaxID=649831 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes sp. N902-109.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 48.5
  • Coverage: 202.0
  • Bit_score: 173
  • Evalue 3.40e-40

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Taxonomy

Actinoplanes sp. N902-109 → Actinoplanes → Micromonosporales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 660
ATGACGATCCCCACCGAGACCGCCGGCCAAGCGCCCGACGAGAGCTCCGCGCTCTGGTTGGCCCGCCTGCGCGCCGACGGGGCCGAGCGCGAGGCGGCGCTCGGCGAGCTCCACGAACTGCTGCTGCGCGCGGCGCGGTTCGAGATCGGCCGGCGGCGCGAATCGCTGTCCCACCTCCGCCCGGGCGACCACGAGGAGCTCGCCTGCCAGACCGCCGACGACGCGCTGCTGGCGATCCTCGCCAAGCTCGACGACTTCCGCGGCGAGAGCCGCTTCACCACCTGGGCCTACAAGTTCGCGCTGCTGGAGGCGGGCGTGAAGGTGCGCCGGCGGGCCTGGCAAGGGAAGGAGATCCCGCTCGAGGAGGAGGCCTGGGCGACGTTCGCGGGGGCCGCCCGGGCCGAGCGGGGCGCCGAGGACCGCGAGCTGTTCGCCGCGATCGGCGAGGAGATCGAGCGCTCGCTCGGCGCCCGCCAGCGCGAGGTGCTGGTCGCGATCGCCCTCAACGACGTGCCGATCGACGTCCTCGCCGAGCGGCTTCACAGCAACCGCGGCGCGATCTACAAGAACCTCCACGACGCCCGCCGCAAGCTGCGCGCGGCGCTCGCCGAGCGCGGCTTCGAGCTGGACCTCTACCTCGACCGAAAGGAGGAGCGATGA
PROTEIN sequence
Length: 220
MTIPTETAGQAPDESSALWLARLRADGAEREAALGELHELLLRAARFEIGRRRESLSHLRPGDHEELACQTADDALLAILAKLDDFRGESRFTTWAYKFALLEAGVKVRRRAWQGKEIPLEEEAWATFAGAARAERGAEDRELFAAIGEEIERSLGARQREVLVAIALNDVPIDVLAERLHSNRGAIYKNLHDARRKLRAALAERGFELDLYLDRKEER*