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scnpilot_solids2_trim150_scaffold_2340_curated_7

Organism: solids_Actinobacteria_3

near complete RP 48 / 55 MC: 1 BSCG 50 / 51 ASCG 9 / 38
Location: 5244..5645

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, PadR-like family n=1 Tax=Actinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU 3971) RepID=C6WET7_ACTMD similarity UNIREF
DB: UNIREF100
  • Identity: 52.3
  • Coverage: 132.0
  • Bit_score: 147
  • Evalue 1.10e-32
PadR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 52.3
  • Coverage: 132.0
  • Bit_score: 147
  • Evalue 3.50e-33
Transcriptional regulator, PadR-like family {ECO:0000313|EMBL:ACU39712.1}; TaxID=446462 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinosynnema.;" source="Actinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU; 3971).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 52.3
  • Coverage: 132.0
  • Bit_score: 147
  • Evalue 1.60e-32

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Taxonomy

Actinosynnema mirum → Actinosynnema → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 402
ATGCACGGCTACGAGATGATCAAAGAGGTCGAGGAGCGCAGCGAGGGGGCCTGGACCCCGAGCGCGGGCTCGATCTACCCGACCCTGCAGATGCTCGAGGACGAGGGTCTGATCCGCGGCGAGGATTCGGGCGGCAAACGCCGCTTTGCCCTCACCGACGCGGGCCGCGCCGAGCAGGAGGCCAAGGCCGAGGAGGCCGCTCCTTGGGACGCCGTCCGCGAGGGCGCGCCCACCGGCCAGATCGCCCTCCGCAACTCGGTCGGCAAGCTGATCGCCGCCGTCAAACAGGTGTCCCACACCGGCGACGAGGACCAGCGCAAGCAGGTCACCGAGCTGCTCGACGAGACCCGCCGCAAGGTGTACGCGATCCTCGCCGAGGAGCCGTCCCAGGATCAGGAGTAG
PROTEIN sequence
Length: 134
MHGYEMIKEVEERSEGAWTPSAGSIYPTLQMLEDEGLIRGEDSGGKRRFALTDAGRAEQEAKAEEAAPWDAVREGAPTGQIALRNSVGKLIAAVKQVSHTGDEDQRKQVTELLDETRRKVYAILAEEPSQDQE*