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scnpilot_solids2_trim150_scaffold_940_curated_1

Organism: solids_Actinobacteria_3

near complete RP 48 / 55 MC: 1 BSCG 50 / 51 ASCG 9 / 38
Location: comp(127..1770)

Top 3 Functional Annotations

Value Algorithm Source
Peptidoglycan-binding lysin domain n=1 Tax=Clostridium papyrosolvens DSM 2782 RepID=F1T798_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 26.4
  • Coverage: 193.0
  • Bit_score: 60
  • Evalue 5.70e-06
Peptidoglycan-binding lysin domain {ECO:0000313|EMBL:EGD49346.1}; Flags: Precursor;; TaxID=588581 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] papyrosolvens DSM 2782.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 26.4
  • Coverage: 193.0
  • Bit_score: 60
  • Evalue 7.90e-06
peptidoglycan-binding LysM similarity KEGG
DB: KEGG
  • Identity: 24.0
  • Coverage: 200.0
  • Bit_score: 56
  • Evalue 4.40e-05

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Taxonomy

[Clostridium] papyrosolvens → Ruminiclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1644
ATGCGTTTCGTTAGGGGAAGGCGTTCACACCAGCTCGGTCTCGTCGCGGCACTGGCCGTGGTGGCGCTCTGTCTCGTATTCGCCGCGACCGCGGCAGCCGAAGTGCGCACCGGGTCGGCGACCGATCCGGTCGAAAACAAACTGCCTGGTCGAGACATCACGGCGGTCGCGGCCTCTTACGACACGGCTGGGTCGATACAGGTCGCAGTGACGACTGCCGGCCCGCCCGAAAGCTCCTCCGATGTCGGTCTCGGCATTCTCGTCGGTACTTCCGTCTCGGGCGAATGCGACGAACCGTTCAGCGTGATCTCGTCTCTCTACTCTCAACCGAACACCGCCACTTGGAGCTTCAACGGCATCGAAGAATCCGGCCTGAAGCAGATCGCCGGGAGCACGACCACCCTGGGCGCATCATCCCCAATCCTCGCCAACCAGCCATTCGATTGCGTCGCACCGTTCGTACTCGAATACAACTCGGCGCTGGAAGAATTCGAAGTGACCGAGGGGCTCGCCGAACCGCTTCGTCTCGTCGGTCCCCCACCACCTCCTCCTCCGGCACCGACTCCCAGCCCGAGCCCGGCTCCCGCGCCTCCGCCCGCGCCCGCGCCACCCCCGAAAGCCAACCTCGTCTTCCCCGCGAAGACCGTCACCCTTCACCGCAACAAGTGGAAAAAGGTCACGGTCAAGATCACGAATACGGGGGACGCCGCGGCGGAGAAGGTATTGCTCAAGGTCGGGAAGGCGCGTGGGGTCGCGCTCAAACCGAAGTCGGGCAAGTTGAAGCTGAAGTCGATCGGGGCCGGGAAGTCGAAGGTCGCCTCGTTCAAGGTCAAGCTCACCAAAAAGGCGAAGGCCCGCTCGAAGCTGAAGCTCTCGCTCACCGCCGCGAAAGGCGTCAAGGCTTCCGGCCTGCTGACCGTCGAAGCGTGGAAGAAAAAGAAGGCGCCCAAGAAGGGCGGTCAAGGGAAGGAAGCTTCCGCGTCGCTGGCGGAACGGATCTTCTACGCGTACAAAACTGAAACGAGCCATTCCGCGACCCTGATCGGGTACGCGTTCATCGACGGCGAATGGGCGTGGCACGGAATGCCCGAGGAAGGCCTGCCCTCGTGTACCGAAATCACCGGCAACGCGGAAAAGGAAGGGTGCGTCAAATACCGCTACGACGCGACCACCGGATCGGTGCAGGTCGGATCGCTCACCGGAACGTTGAACAGCGACGGTGGGCTCGAAGTCGACGGCGAAACGTACTTCGCGACCTCGACCCCGGCGGCCGGCACGCGCCTGCAGGTCGAACAGGAATTCATCGGCTACAGCGGCCTCTGCGGCCTGATCACCGGCTGCTCGACCTGGCACGAACACCTCCTGCTCACCGAATCGAGCGAATTCGTCCTCTCGAAGGAATCGCTGACCACCGTCGGCGGCACCGGGCCGGGCCAAACCTTCATCGCCGCGGGCAGCTACCCGCCCGATCAACACGGCACCTACGCGATCGAAAAAGGCGCGCGAATCAAGTTCACCTTCGCCGACGGCACCGTCGAGACCAAGACGATCGCGATCCTCCTGAACAAGGAAGGCAAGCCTGACCCGGTCAATGAAGGGCTACTGCTCGGCGAGAACTACTTCACCTTCGCGCACACTGAGTAG
PROTEIN sequence
Length: 548
MRFVRGRRSHQLGLVAALAVVALCLVFAATAAAEVRTGSATDPVENKLPGRDITAVAASYDTAGSIQVAVTTAGPPESSSDVGLGILVGTSVSGECDEPFSVISSLYSQPNTATWSFNGIEESGLKQIAGSTTTLGASSPILANQPFDCVAPFVLEYNSALEEFEVTEGLAEPLRLVGPPPPPPPAPTPSPSPAPAPPPAPAPPPKANLVFPAKTVTLHRNKWKKVTVKITNTGDAAAEKVLLKVGKARGVALKPKSGKLKLKSIGAGKSKVASFKVKLTKKAKARSKLKLSLTAAKGVKASGLLTVEAWKKKKAPKKGGQGKEASASLAERIFYAYKTETSHSATLIGYAFIDGEWAWHGMPEEGLPSCTEITGNAEKEGCVKYRYDATTGSVQVGSLTGTLNSDGGLEVDGETYFATSTPAAGTRLQVEQEFIGYSGLCGLITGCSTWHEHLLLTESSEFVLSKESLTTVGGTGPGQTFIAAGSYPPDQHGTYAIEKGARIKFTFADGTVETKTIAILLNKEGKPDPVNEGLLLGENYFTFAHTE*