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scnpilot_solids2_trim150_scaffold_2151_curated_5

Organism: solids_Actinobacteria_3

near complete RP 48 / 55 MC: 1 BSCG 50 / 51 ASCG 9 / 38
Location: comp(5509..7149)

Top 3 Functional Annotations

Value Algorithm Source
translation elongation factor n=1 Tax=Patulibacter americanus RepID=UPI0003B634A8 similarity UNIREF
DB: UNIREF100
  • Identity: 50.7
  • Coverage: 546.0
  • Bit_score: 440
  • Evalue 2.00e-120
selenocysteine-specific translation elongation factor SelB; K03833 selenocysteine-specific elongation factor similarity KEGG
DB: KEGG
  • Identity: 41.3
  • Coverage: 494.0
  • Bit_score: 300
  • Evalue 1.30e-78
Tax=RBG_16_Actinobacteria_64_13_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 38.6
  • Coverage: 590.0
  • Bit_score: 317
  • Evalue 3.60e-83

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Taxonomy

RBG_16_Actinobacteria_64_13_curated → Rubrobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1641
ATGACAGACGGATTCGCCTCCGACGCGGCGCCGTCGCTCACCGTCGGCACGGCCGGTCACATCGACCACGGCAAGACGGCGCTGGTGCGGGCGCTGACGGGTCGGGACACGGACCGGCTCGCGGAGGAGCGGCGGCGGGGGATGTCGATCGAGCTCGGCTATGCGGAGCTCGCGCTCGGGGAGCGGCGGCTGAGCCTCGTCGACGTGCCCGGGCACGAGCGCTTCGTGCGGACGATGATCGCCGGGGCGACCGGGATCGACCTCTTCCTGTTGGTGGTGGCCGCCGACGATGGCGTGATGCCGCAGACGCGGGAGCACCTCGCGGTGCTGCGGGCGCTGGGGGTCGATGCGGGGGTCGTGGCTCTGACCAAGGTGGACCTCGTCGACGGGCCGGATCGGGGGCGGGTCGCGGGCGAGCTGGGCGAGCTGCTGCCGGGAGCGCCGATCGTCGCGGTGAGCGCGCGGAGCGGGGAGGGGATCGACGAGCTGCGGGCGCGGTTGCTCGACGTCGCCGAGCGCGTCGATGCGGCTCGCGACGCCGGTGTCGAGGGGCCGCCGATCGGGTCCCGAGGGGCTCTTCCGCCGGCAGTCGGTCGAGTTGCGGGACCGGCGTCGCAGGCCCGGCGCGAGGCCGCGGCCGTCGGTGGGCCGGCGGATCGGGACGACCCGGTCCTCCATGTCGACCGGGTATTCACCGTCGCCGGGCACGGGACGGTGGTGACCGGGACGCTCTGGTCGGGGAGTTTGCGGCGAGGGGACAGGGTCGTCGTCCTCCCCGGTGGGAAGGAGGTGCGGATCCGCTCGATCGAGAGCCACGATTGCTCGCTCGACGTCGTCGGGCCGCGGCGGCGCGTGGCGCTCAACCTGGCCGGGCTGCGGCGCGAGGAGATCGGGCGCGGGGACGTCGTCACTGTGGCCGGAACGGTGCTCGCGCCGACCTACCGGCTCGACGTGGCGCTCGACGGGGAGGCGCGAGCGGTGCTCGACGAGCGCCGCGTCCAGGTCCACCACGGCACCCGCGAGGCGCCGGCGCGTGTCATCGACCTCGGCGACGGCACCGCGCAGCTGCGGCTCGAGCAGCCGCTCCTGGCCCGGCGCGGCGACCGCGTGGTGGTCCGGCGGATCGCGCCGCCCGACACGCTTGGCGGGGCCATCGTCGTCGACCCGGCCCCACGGCGACATTCGGACCGGTCAGGAATGTCCGTGTCGATTTCTGGTTGCTCAGCACCCAAAAGTCGACGAGCGTCCGAGGGGACCGGGGCGCCGGGGCCCGGGCCGCTCGCCCGGCGCGTTCTCGGCGAGCTCGAGGCCGATGGGGAACGGCCGCGGACGCCGGCGAAGCTGTCGGAGGACCTCGGGGAGCCGCGGCGGGAGGTGGAACGGGCTGTCGGCGAGCTGGTCGACGCAGGGACCGCGGTGCGGTTGAAGGCCGACGTCGTCTACCCGACCGCGGAAGCAGAGCGGCTCGCCGAGGCGGTGGTGGCGCTGGTCGCTCGCGAGGGGTCGACGAGCATCGGCGAGGTTCGCGACGCGCTGGGGCTCAGCCGCAAGTACGCGCAGGCGCTGCTCGAGCACCTCGACGGTGAGCGGGTGCTGCGGCGCGACGGCGACCGGCACTACCCGCGGGGCGGGGCGCCATAG
PROTEIN sequence
Length: 547
MTDGFASDAAPSLTVGTAGHIDHGKTALVRALTGRDTDRLAEERRRGMSIELGYAELALGERRLSLVDVPGHERFVRTMIAGATGIDLFLLVVAADDGVMPQTREHLAVLRALGVDAGVVALTKVDLVDGPDRGRVAGELGELLPGAPIVAVSARSGEGIDELRARLLDVAERVDAARDAGVEGPPIGSRGALPPAVGRVAGPASQARREAAAVGGPADRDDPVLHVDRVFTVAGHGTVVTGTLWSGSLRRGDRVVVLPGGKEVRIRSIESHDCSLDVVGPRRRVALNLAGLRREEIGRGDVVTVAGTVLAPTYRLDVALDGEARAVLDERRVQVHHGTREAPARVIDLGDGTAQLRLEQPLLARRGDRVVVRRIAPPDTLGGAIVVDPAPRRHSDRSGMSVSISGCSAPKSRRASEGTGAPGPGPLARRVLGELEADGERPRTPAKLSEDLGEPRREVERAVGELVDAGTAVRLKADVVYPTAEAERLAEAVVALVAREGSTSIGEVRDALGLSRKYAQALLEHLDGERVLRRDGDRHYPRGGAP*