ggKbase home page

scnpilot_solids2_trim150_scaffold_1973_curated_5

Organism: solids_Actinobacteria_3

near complete RP 48 / 55 MC: 1 BSCG 50 / 51 ASCG 9 / 38
Location: comp(4343..5482)

Top 3 Functional Annotations

Value Algorithm Source
ABC-type dipeptide/oligopeptide/nickel transport system, permease component n=1 Tax=Mycobacterium smegmatis JS623 RepID=L0IPH2_MYCSM similarity UNIREF
DB: UNIREF100
  • Identity: 59.0
  • Coverage: 363.0
  • Bit_score: 420
  • Evalue 2.00e-114
ABC-type dipeptide/oligopeptide/nickel transport system, permease component similarity KEGG
DB: KEGG
  • Identity: 59.0
  • Coverage: 363.0
  • Bit_score: 420
  • Evalue 6.10e-115
ABC-type dipeptide/oligopeptide/nickel transport system, permease component {ECO:0000313|EMBL:AGB20753.1}; TaxID=710686 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium smegmatis JS623.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 59.0
  • Coverage: 363.0
  • Bit_score: 420
  • Evalue 2.70e-114

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Mycobacterium smegmatis → Mycobacterium → Corynebacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1140
GTGCCTCCCGAGTCTGAGAAACAAGGCACCGAGGCGCCGATCCCCACCGGGACCGGCGCCTTGGATGCCGGCTTGGGCATCGAATCCGACGGCGCCCGCGTAGTCGAGGCGGAGGCCGGCGACGGTCGCCAGGCCGGCGGCCCTTGGAGGATCGCCGGGCGGCGCCTGCGTCGCAACAAGGTGGCGCTGTTCTCGCTCGCGATCTTCTTCCTGATCGTCATCTGCTGCCTGCTCGCGCCGGTCTGGGCCAATCACGTCGCCGACACCGGTCCCAACACCACCCACACGCTGGAGAAACTCCACGTGAACGGGGAAGTGAGGGAAGTGGTCGAACCGAGCGGCAAGGCGATCGGCCCGCAGTGGTTCGAAGCCGGGGGCAAGTTCTTCCTCGGCGCCGACGGCCACCTCGGACGCGACGAGATGGTCCGCCTTCTCTACGGCGGCCGTTCCTCACTCTTCATCGGCATTGTCGCCGCGCTCATCACGACCCTGTTGGCGGTGACGCTCGGCCTGCTCTCCGGTTACTACGGCGGCCTCACCGACACCTTCATCTCGCGGATCATGGACGTCATCTGGTCCTTCCCGGTGGTGCTCTTGGGCATCGCCCTGGGTATCGCCTTGGCGGTGGGGGGCCTGAAGTTAGGTCCGATCCACCTCAAGTCGAGCTCCTTATGGATCCCGACCCTCATCATCGGCGTGGTCTACACGCCGTACATGGCGAGGCCGTTGCGCGGCGAAATCCTCGCCCTACGCGAGAAAGAGTTCATCGAGGCCGCGGTCGCCCAGGGCGCGAGCGACCGCCGGATCATGTTCATCGAGCTGCTGCCCAACCTGCTCTCGACGATCATCGTCTTCTTCACCCTCAACATCGCCAACAACATGTTGTTGGAGGCAACCCTTTCCTACCTCGGCGCCGGCGTTCAGCCGCCCTCTTCCTCCTGGGGAACGATGATCTCGGAAGGGTTCGACGCCCTCTACAGCCAGCCGATCCTGACCATCATCCCGGGCACCGCGATCCTCCTCACCGTACTGTCCGTGAACGTCTTCGGTGACGGCCTGCGCGATGCGCTCGACCCCAAGTCGAAGGTCCGCTTCGAGGCTCGCGCGGGCACCGCCGCCGAGATGGACAATCCGGTCTGA
PROTEIN sequence
Length: 380
VPPESEKQGTEAPIPTGTGALDAGLGIESDGARVVEAEAGDGRQAGGPWRIAGRRLRRNKVALFSLAIFFLIVICCLLAPVWANHVADTGPNTTHTLEKLHVNGEVREVVEPSGKAIGPQWFEAGGKFFLGADGHLGRDEMVRLLYGGRSSLFIGIVAALITTLLAVTLGLLSGYYGGLTDTFISRIMDVIWSFPVVLLGIALGIALAVGGLKLGPIHLKSSSLWIPTLIIGVVYTPYMARPLRGEILALREKEFIEAAVAQGASDRRIMFIELLPNLLSTIIVFFTLNIANNMLLEATLSYLGAGVQPPSSSWGTMISEGFDALYSQPILTIIPGTAILLTVLSVNVFGDGLRDALDPKSKVRFEARAGTAAEMDNPV*