ggKbase home page

scnpilot_solids2_trim150_scaffold_828_curated_24

Organism: solids_Actinobacteria_3

near complete RP 48 / 55 MC: 1 BSCG 50 / 51 ASCG 9 / 38
Location: 22745..23623

Top 3 Functional Annotations

Value Algorithm Source
Probable DNA repair protein TcarDRAFT_0620 n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HS47_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 52.4
  • Coverage: 273.0
  • Bit_score: 284
  • Evalue 1.30e-73
Non-homologous end joining protein Ku {ECO:0000256|HAMAP-Rule:MF_01875}; TaxID=401526 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Thermosinus.;" source="Thermosinus carboxydivorans Nor1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 52.4
  • Coverage: 273.0
  • Bit_score: 284
  • Evalue 1.80e-73
Ku protein; K10979 DNA end-binding protein Ku similarity KEGG
DB: KEGG
  • Identity: 47.9
  • Coverage: 305.0
  • Bit_score: 265
  • Evalue 1.50e-68

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Thermosinus carboxydivorans → Thermosinus → Selenomonadales → Negativicutes → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 879
ATGGCAAGAGCGATCTGGTCCGGCTCGATCAGCTTCGGGCTGTTGAACGTCCCCGTGCGGATGTACAGCGCCGTGGCGCGGCGCAACATCGCGCTGCGCGAGATCCGCGCGTCGGACTCGGCGCGGATCAAACACCGCCGCGTCGCCGAGGGCACCGACGAAGAGGTCCCCTACGACGAGATCATCAAAGCCTACGAGCTGACCCCGGGCCAGTACGTGCCGCTGACCAAGGACGAGATGCAGGCCTTGGCGCCGGAAAAGACGCGCGCGATCGAGGTCGAGGACTTCGTCGACCTCGACGAGATCGACCCGATCTACTTCGACAGCCCCTATTACCTCGGCCCGGCGGACGGCGCCGAGAAAGCGTATTCGCTGCTGGCGCGGGCGATGCACGCCTCGGGCAAGGTGGCGATCGCCCACTTCGTCCTGCGCAACAAAGAGCACCTGTCCGCGATCCGCAGCGACGGCAAGGTGCTGACGCTGACGACGATGCGCTTTGCCGACGAGGTCGTGCCGGTCGACGAGCTCGAGATCCTCCCCGACAAAGCCGCCAAACCGGCGAAACGGGAGCAGGAGATGGCCGAGCAGCTGATCGAGTCCCTCTCCACCGACTTCGAACCGCAGGCCTACAAGGACGATTACCGCGAGCAGCTGCTGGCGCTGATCGAACGCAAGGCGGAAGGCAAGGAGATCGTCGCGTCGGAGGCCGAGGCGCCGAAGGCGACCAAAGCGCCCGACCTGATGGCGGCGCTGGAAGAGAGCATCGCCGCGGCCCAGGGCGGCAAAGCCAAGAAACCGGCGAAAAAAGCCCGGAAAAAAGCCGCTCCCAAAGCCAAAAAATCGCCCGCCAAAAAACGGGCGAAAGCCAAATCGAAATAG
PROTEIN sequence
Length: 293
MARAIWSGSISFGLLNVPVRMYSAVARRNIALREIRASDSARIKHRRVAEGTDEEVPYDEIIKAYELTPGQYVPLTKDEMQALAPEKTRAIEVEDFVDLDEIDPIYFDSPYYLGPADGAEKAYSLLARAMHASGKVAIAHFVLRNKEHLSAIRSDGKVLTLTTMRFADEVVPVDELEILPDKAAKPAKREQEMAEQLIESLSTDFEPQAYKDDYREQLLALIERKAEGKEIVASEAEAPKATKAPDLMAALEESIAAAQGGKAKKPAKKARKKAAPKAKKSPAKKRAKAKSK*