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scnpilot_solids2_trim150_scaffold_1295_curated_2

Organism: solids_Actinobacteria_3

near complete RP 48 / 55 MC: 1 BSCG 50 / 51 ASCG 9 / 38
Location: comp(1834..2904)

Top 3 Functional Annotations

Value Algorithm Source
ribose ABC transporter permease n=1 Tax=Corynebacterium-like bacterium B27 RepID=UPI0003B659FC similarity UNIREF
DB: UNIREF100
  • Identity: 52.4
  • Coverage: 353.0
  • Bit_score: 348
  • Evalue 6.80e-93
Putative ABC transporter permease protein {ECO:0000313|EMBL:GAF47095.1}; TaxID=1219028 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus wratislaviensis NBRC 100605.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 50.5
  • Coverage: 333.0
  • Bit_score: 330
  • Evalue 2.70e-87
ABC transporter permease; K10440 ribose transport system permease protein similarity KEGG
DB: KEGG
  • Identity: 42.5
  • Coverage: 294.0
  • Bit_score: 225
  • Evalue 2.10e-56

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Taxonomy

Rhodococcus wratislaviensis → Rhodococcus → Corynebacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1071
ATGAGCACCAGCACAGCGCTCCTCGGCAAGGCCTGGAGGGCGACGGCCAACTTCCGTCCGATCCTGATCCTCGTGGTCGCGATGTTCATCTTCTTCACCGTCACCCAGAGCGCCTTCAGCACCGACCAGAACCTGAAGAACATGCTCGCCGACTCGGCGATCCTCTGGATCATCGCGATGGGGATGACGTTCGTCCTCATCTCCGGCGGCTTCGACCTCTCGGTCGGCGCGACCGCCGCCCTGGTCGGGATCTTCATGGTGAAAGTCCTCGCCCTCGGGCTGCCCGGTGGTGTGGTGTTGGTGCTTATGGTGTTGTTCGGCGCGCTCGTCGGGGCGCTCCTGAACGGGATCCCGATCGGGCGCCTCAACCTCTCGGTCTTCGTCGTCACCCTGGCCTCGATGATCGCCCTCACCGGCGTGGTGGAACTCTGGTCGGGCGGTGAATCGTCATACGTGACCGCGCCGGTGGCGGCGATGATCGGCGTCGACAACGTGCTCGGCTTCCCGGTGCCGATCTGGATCATGGCCGCGGTCTTCCTCGCCGCGCTCTACGTGCAGCACCTCACCTTCTTCGGCCGTGACGTGTACGCGATCGGCGGCAGCCCGATTGCCGCCAAGCTGGCCGGGATCCGCGTGCCGCGGACGCTGATGCTGGTCTACGGGGTGATGGGCGGCTGCGCGGCGCTGGCGGGCGCGATCGCGGTCGGCCGGGTCGGCGCGGCGACGCCGACCGTCGACTCGACCATCGCCCTGCAGGCGATCGCCGCCGTCCTCCTCGGCGGCACCGCGCTGACCGGCGGCTCGGGCGGCGTCGGCGGCACCGCGCTCGGCGTCCTCTTCATCGCGATCCTGCAGAACGGCCTCAGTCTGGCCGGGGTCTCCAGCGACTGGCAGAACGTCGTCACCGGGGTGATCCTGCTGCTGGCGGTGTTGAGCGACCGCTTCAACTTCTCCGACCTGCTGCGGCGCTCCTCCGAGGATGACGGCGCGGCCGGGGCCGGCGGCGATGCCACCGGCGATCCGGCCACCCTGGGCGCCGGCGCGGGCCCGCCCGCGCACCTCAATGCCTGA
PROTEIN sequence
Length: 357
MSTSTALLGKAWRATANFRPILILVVAMFIFFTVTQSAFSTDQNLKNMLADSAILWIIAMGMTFVLISGGFDLSVGATAALVGIFMVKVLALGLPGGVVLVLMVLFGALVGALLNGIPIGRLNLSVFVVTLASMIALTGVVELWSGGESSYVTAPVAAMIGVDNVLGFPVPIWIMAAVFLAALYVQHLTFFGRDVYAIGGSPIAAKLAGIRVPRTLMLVYGVMGGCAALAGAIAVGRVGAATPTVDSTIALQAIAAVLLGGTALTGGSGGVGGTALGVLFIAILQNGLSLAGVSSDWQNVVTGVILLLAVLSDRFNFSDLLRRSSEDDGAAGAGGDATGDPATLGAGAGPPAHLNA*