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scnpilot_solids2_trim150_scaffold_1295_curated_4

Organism: solids_Actinobacteria_3

near complete RP 48 / 55 MC: 1 BSCG 50 / 51 ASCG 9 / 38
Location: comp(4421..5566)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein, partial n=1 Tax=Corynebacterium-like bacterium B27 RepID=UPI0003B79212 similarity UNIREF
DB: UNIREF100
  • Identity: 36.2
  • Coverage: 320.0
  • Bit_score: 214
  • Evalue 1.60e-52
Uncharacterized protein {ECO:0000313|EMBL:GAF47094.1}; TaxID=1219028 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus wratislaviensis NBRC 100605.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 35.7
  • Coverage: 333.0
  • Bit_score: 210
  • Evalue 4.30e-51
periplasmic binding protein/LacI transcriptional regulator; K10439 ribose transport system substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 29.8
  • Coverage: 285.0
  • Bit_score: 90
  • Evalue 1.50e-15

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Taxonomy

Rhodococcus wratislaviensis → Rhodococcus → Corynebacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1146
GTGAAACGTAGATCTGATCGAGCGGCCTTCGTGCGCATCTGCGCGGTGTTGGCCTTGTTGGCGTTGGCAGCCCTGACCATCACCGCCTGTGGTGGCAGCTCTGGCGACTCAAGCACCTCCGGAGAAACCTCTTCGGCGACCGAAGCGACGTCCGAAGGCGGCGGCGGCGAAGCCGCGGAAGACTCCGAAACCGTCTCCGGCACGACCGCCGAGAGCGAATACAGCGGTCCGCAGAAAGACCTGCCCGCCACCTTCGGCGAGCCGCAGAAATCGGGCGGGCCGATGACCTTCGGCTACCTCCAGATCTACGGCTCGCTGCCGGTGCTGGGGACCGAGCAGAAGGGGGCGGAAGAAGAAGCCGCCAACCTCGGCGTGAAGTTGATCGTCAAGGACGCGCAGCTGAACCCGCAGACGCAGGTGTCGCAGTTCAACCAGCTGCTGGCCCAGGGCGTCGACGGGATCGTCGTCTACCCGGTCGTCGCCGGCTCGCTCGGGCCGTCACTCGAACGGGCCAAATCGGAGGGCATCCCGGTCGTCTCGACCAACGCCCGGCCCGACGTGACCAAACCGCTGCCGCCCGGCTACACCGCCGACGTCGAGCAGACCCTTGACGTCGAGGCCTACGAAATGGCGCGGGTGATGTCGGAATCGAACCCCGGCGCCAAGTTCGGGATCATCGGGCTCGGCCTGCCGGTCGAAGCGCTGAAATACCTCGCCGCCAGGCAGCAGTTCTGGGGTGAACACTTCGGCCTCGAATACGTCGGTACCAGCGACGCCAAGCAGGACACGCCGACCGCGTACGGCCCGGCCGCCAGCGAGCTCCTGTCCAAGGCGTCGGACATCGAACAGATATTCACCTACAACGACGCCGTCGCCCTCACCGCGTCCACGGTCGCTCGCTCGTCGGGCAAGCCGGACATCGAAATCGCCGGCGGCTCGGGGACCGAAGAAGCGGCCCTGAAGGCGATCGAAGCGGGGCAGATCACGATGAGCTACCAGATGCCCTGGGCCGAAACCGGCGCGCAGATGATCAAGGGCGCGTACGACGAGGCGACCAAACAACACCTGCCGCTGCCGGAAACGGTGGGCTTGCGGGGCACCGTGATCACCCAGGAGAACGCGGGCGAAGTGGAACCGACGAAGTAA
PROTEIN sequence
Length: 382
VKRRSDRAAFVRICAVLALLALAALTITACGGSSGDSSTSGETSSATEATSEGGGGEAAEDSETVSGTTAESEYSGPQKDLPATFGEPQKSGGPMTFGYLQIYGSLPVLGTEQKGAEEEAANLGVKLIVKDAQLNPQTQVSQFNQLLAQGVDGIVVYPVVAGSLGPSLERAKSEGIPVVSTNARPDVTKPLPPGYTADVEQTLDVEAYEMARVMSESNPGAKFGIIGLGLPVEALKYLAARQQFWGEHFGLEYVGTSDAKQDTPTAYGPAASELLSKASDIEQIFTYNDAVALTASTVARSSGKPDIEIAGGSGTEEAALKAIEAGQITMSYQMPWAETGAQMIKGAYDEATKQHLPLPETVGLRGTVITQENAGEVEPTK*