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scnpilot_solids2_trim150_scaffold_2532_curated_2

Organism: solids_Actinobacteria_3

near complete RP 48 / 55 MC: 1 BSCG 50 / 51 ASCG 9 / 38
Location: 125..904

Top 3 Functional Annotations

Value Algorithm Source
IclR family transcriptional regulator n=1 Tax=Nocardiopsis potens RepID=UPI00034A9566 similarity UNIREF
DB: UNIREF100
  • Identity: 35.7
  • Coverage: 249.0
  • Bit_score: 123
  • Evalue 4.40e-25
Transcriptional regulator {ECO:0000313|EMBL:AHY46593.1}; TaxID=42256 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter radiotolerans.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 31.4
  • Coverage: 245.0
  • Bit_score: 119
  • Evalue 5.20e-24
regulatory proteins, IclR; K13641 IclR family transcriptional regulator, acetate operon repressor similarity KEGG
DB: KEGG
  • Identity: 33.5
  • Coverage: 224.0
  • Bit_score: 117
  • Evalue 7.60e-24

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Taxonomy

Rubrobacter radiotolerans → Rubrobacter → Rubrobacterales → Rubrobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 780
ATGCAGATAATCAGTCGCACCGTCTCGATTCTCGAGGAGGTGGCACGGCGGCCCGACGGTGGCGGGCTCGTCGAGATCGCCAATGCCACTTCGCTCCCCGCGGCGACGTGCCACCGGCTGCTGGCGGCGCTCGCCGAAGACGAGCTGGTGCAGCGTGACCCGCTGACCCGTCGCTACAGCGTCGGGCCGGGGCTGGTGCAGCTGTCCGGGATGGTGACCCAGATCGGCCGCGGCGCCTCGATCGAAGCGGGGATGACGGCGCTGCGCGACCGCTGGCGCGAGTGCTTCTTCCTCGCCTCGGTGGTCGACGACGCGATCATCTGCGTGCGTTCGATGCCGACGATCGACGCCAACCGGATGACCGTGACGGTGCCGCTCGGGCAGCCGATGGCGCCGAACGTGGCCGGCTCGGGGAAGGCGATCCTCGCCTACGTGCCGCCGGAGCAGCGGGAACGCCTGGTCGCCGCGGGGGGCGGCATGGCGCGGCTGACCGAGAACTCCATCGTCGACGAGGAGGACTTCGAGTCCGAGATGGTCCGAATCCGTGAACGCGGCTACGCGATCTGCGACGAGGAGTCGGAGATCGGCGCCGCCACCATTGCCGTGCCGATCGTCCTCCCGGACGGCGAGGTGCGCAGCGCCCTCGCCGCGATCGGCCCCCGCGACCGCATCCTCACCCTCGCCGACGACGGCATGATCGACGACATGACCCGCACCGCCGAGGTGATCGCCGGCCTCGAGCAAGGCACGATCGTCGACGCTCTGGTGCCGGGGCTTTAG
PROTEIN sequence
Length: 260
MQIISRTVSILEEVARRPDGGGLVEIANATSLPAATCHRLLAALAEDELVQRDPLTRRYSVGPGLVQLSGMVTQIGRGASIEAGMTALRDRWRECFFLASVVDDAIICVRSMPTIDANRMTVTVPLGQPMAPNVAGSGKAILAYVPPEQRERLVAAGGGMARLTENSIVDEEDFESEMVRIRERGYAICDEESEIGAATIAVPIVLPDGEVRSALAAIGPRDRILTLADDGMIDDMTRTAEVIAGLEQGTIVDALVPGL*