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scnpilot_solids2_trim150_scaffold_3718_curated_8

Organism: solids_Actinobacteria_3

near complete RP 48 / 55 MC: 1 BSCG 50 / 51 ASCG 9 / 38
Location: comp(4967..5602)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, TetR family n=1 Tax=Saccharomonospora viridis (strain ATCC 15386 / DSM 43017 / JCM 3036 / NBRC 12207 / P101) RepID=C7MTT6_SACVD similarity UNIREF
DB: UNIREF100
  • Identity: 43.3
  • Coverage: 187.0
  • Bit_score: 157
  • Evalue 1.70e-35
Putative TetR family transcriptional regulator {ECO:0000313|EMBL:GAF49540.1}; TaxID=1219028 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus wratislaviensis NBRC 100605.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 48.6
  • Coverage: 214.0
  • Bit_score: 184
  • Evalue 1.40e-43
transcriptional regulator, TetR family similarity KEGG
DB: KEGG
  • Identity: 43.3
  • Coverage: 187.0
  • Bit_score: 157
  • Evalue 5.40e-36

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Taxonomy

Rhodococcus wratislaviensis → Rhodococcus → Corynebacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 636
ATGCCGGACAGTGGGGGGCACGAGCGAACAGAACCGCGGCCGTCGCCGCGCAGCAAGCGGGCCGAGATCGTCGCCGTGGCGACCGAGTACTTCGGCGACAACGGCTACGAAGACACCAGGTGGGCGGACGTCGCTTCCGCCGTGGGGGTCGGGCCGACCGCCCTCTACCACTACTTCGAATCGAAGCAGCACTGCCTCTTCGAAATCCTGGTCGAAGCCGTCGAGGGCGCCCTGGCCGAGTTCGCGCGGCTGAACCAGGGCGACTTTGCCGTCGCCTTCCCGGCGGTGGTGCGGGCCAGCTTCGAACGCGACGACCGCGATGCCCGCCGCGCCCGCGTCCTGGTCGCCGAGCAGGGGCTGGTCCGCCACCCCCGCCCCTCGTCGCGCGAGGAGGACGCCCGCCTGCGCGCCTTCGCCCTGCTGAAGGAATACGAGGCGGCCTGGCGCGACATGCTCGCCGCCGGAATGGCGGCCGGCGCGATCCCCACGGCCGACGCCGACCTCCTGACCCGCCTCGTGATCGGCACCTACAACAGCGTCTGGCAGTGGTACCGCCCCGACGGCCGCCTCGGCCTCGACGAGGTCGCCGACTTCTACGTGCCGCGGCTGCTGGCGCTGGCCGGCCTGCCGGAGTAA
PROTEIN sequence
Length: 212
MPDSGGHERTEPRPSPRSKRAEIVAVATEYFGDNGYEDTRWADVASAVGVGPTALYHYFESKQHCLFEILVEAVEGALAEFARLNQGDFAVAFPAVVRASFERDDRDARRARVLVAEQGLVRHPRPSSREEDARLRAFALLKEYEAAWRDMLAAGMAAGAIPTADADLLTRLVIGTYNSVWQWYRPDGRLGLDEVADFYVPRLLALAGLPE*