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scnpilot_solids2_trim150_scaffold_3600_curated_2

Organism: solids_Actinobacteria_3

near complete RP 48 / 55 MC: 1 BSCG 50 / 51 ASCG 9 / 38
Location: comp(1111..1914)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma 28 subunit, Sig B/F/G subfamily n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3EZ99_CONWI similarity UNIREF
DB: UNIREF100
  • Identity: 45.6
  • Coverage: 252.0
  • Bit_score: 205
  • Evalue 9.10e-50
sigma-B/F/G subfamily RNA polymerase sigma-28 factor; K03090 RNA polymerase sigma-B factor similarity KEGG
DB: KEGG
  • Identity: 45.6
  • Coverage: 252.0
  • Bit_score: 205
  • Evalue 2.90e-50
RNA polymerase, sigma 28 subunit, Sig B/F/G subfamily {ECO:0000313|EMBL:ADB51864.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 45.6
  • Coverage: 252.0
  • Bit_score: 205
  • Evalue 1.30e-49

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Taxonomy

Conexibacter woesei → Conexibacter → Solirubrobacterales → Thermoleophilia → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 804
ATGAACGCACCGTCGACCGCCGAGAGAACGGCCATCCACGGTCACGAGCGAGAGCTATGGCGTCGCCTCGGCAGGCAGCGCGACCAGGAGGCGCGCGAAGAGCTGGTCGCGATCTACCTGCCGATGGCACGGCGGATGGCCGGGCGTTACGCCGGCGTGGTGGAGCCGTACGACGACCTCGTCCAGGTCGCGAGCATCGGCCTGCTGAACGCGATCGACCGCTACGACATCGAGCGCGGCACGCCGTTCATCGGCTTCGCCAAGCCGACCATCATGGGCGAGCTCAAACGCTATTTCCGCGACAAGGTGTGGACGATCCGTGTGCCGCGGGTGCTGCACGACCGGATGGCGGCGATCGAGACCGCGACCGAGGACCTCACCGAGGAGCTCTCCCGGCCGCCGTCGCCGAAGGAGATCGCCGCGCACCTGCAGATGGACCTGGGCGACGTGCTGGAGACGCTGGCCGCGGAGGAGAACCGACGGCCGCTCGGTTTCGAAGCCCACATCCAGGGCGAGGACGGCGACGGGCCGGCGACGCCGGAGTGGATCGGCCGGGTCGACGACGGCTACGAGCTGGTCGAGGACCGGCTGGCGGTGGAGACGGTGCTGCCGAGCCTCGACGACCGCGAGCGCGAGGTGCTGCGGCTGCGCTTCGTCGAGGACCTGCCGCAGTCGAAGATCGCCGCCCGCATCGGCTGCTCGCAGATGCACGTCTCGCGCCTCCTGCGCGGCACGCTGGCGCGGCTGCGCGAGCAGGCCGAGGCTACGGGCGAGGCGACTCGAACGACAGCATCCCCCAGGTGA
PROTEIN sequence
Length: 268
MNAPSTAERTAIHGHERELWRRLGRQRDQEAREELVAIYLPMARRMAGRYAGVVEPYDDLVQVASIGLLNAIDRYDIERGTPFIGFAKPTIMGELKRYFRDKVWTIRVPRVLHDRMAAIETATEDLTEELSRPPSPKEIAAHLQMDLGDVLETLAAEENRRPLGFEAHIQGEDGDGPATPEWIGRVDDGYELVEDRLAVETVLPSLDDREREVLRLRFVEDLPQSKIAARIGCSQMHVSRLLRGTLARLREQAEATGEATRTTASPR*