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scnpilot_solids2_trim150_scaffold_275_curated_7

Organism: solids_Actinobacteria_3

near complete RP 48 / 55 MC: 1 BSCG 50 / 51 ASCG 9 / 38
Location: comp(4855..5829)

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein n=1 Tax=Actinomadura madurae LIID-AJ290 RepID=U2PJN6_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 50.8
  • Coverage: 311.0
  • Bit_score: 297
  • Evalue 1.20e-77
Permease component of ribose/xylose/arabinose/galactoside ABC-type transporter {ECO:0000313|EMBL:EXG82735.1}; TaxID=927661 species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 53.0
  • Coverage: 296.0
  • Bit_score: 305
  • Evalue 1.10e-79
rbsC; ribose ABC transporter permease; K02057 simple sugar transport system permease protein similarity KEGG
DB: KEGG
  • Identity: 37.7
  • Coverage: 321.0
  • Bit_score: 175
  • Evalue 2.30e-41

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Taxonomy

Cryptosporangium arvum → Cryptosporangium → Frankiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 975
GTGAGGGTGGCGCTCGAGCAGCGCTTCGGGCCGCTCGCCGAGTGGCGCAGCCCCCGCGGCCTCTTCACCGGCCTGGCGGCGCTCGGCCTGGCCGTGCTGGTCGTCCTCGCCCTGACCACTGACCGCTTCCTCACGGTCGAAAACATCAAGGCGATCCTCAGCTCCGCCTCGATCGTCGGGATCATGGCGCTCGGCCTCACCTTCATCACGCTGATCGGCTCGCTGGTCTCGCTGGCGATCGCCGCGACCGCGGTGATGGGGGCGATGGTCTTCCTCGCCGAGCTCCACCTCGGACTGGTCCCGGCGCTGGCGATCTCGATGGCGGCGGGCGCCGCGGTCACCGCGCTGCAGGGGCTGATCATCGGCGCCTGGGGCGCCAACCCGGTGATCCTCACGATCGGCGCCGGCTTCCTGCTCAGCGGGATCACCACCAAGGCCTCGGGCGGCGTGATCGTCCAGCCGGCCGGCGGCGGCTACGCGACCCTCAACTCGACCCCGCTCGGAGTGCCGCTCGGCGTCTACGTGATGGTGGTGCTGGCGCTGATCCTGCAGTTCGTCCTCAAGCGCACGGTGCTCGGCCGGCGGGTGACGCTGATCGGCGAGAACCGCGAGGCGGCGCGCGCCGCCGGGATGCGGATCCCGCGGATCACCGCGATCGCCTTCGCCATCGCGGGCGCCTCCTTCGCGCTCGGCGGCGCCTTCCTCGGCGCCTTCAACAAGGGCGCCTCGGCGCAGCTGGAAGGGACGGCGACCTTCGACGTGATCGCCGCGGTGCTGGTCGGCGGCACGCTGATCTCAGGCGGGCGGGGATCGGCACTGCGGACGCTGGCGGGGGCGATCGTGATCGCGACGATCTCCGACCTCCTCTTGCTGCGCGGCTTCAACACCGGGGCGCAGATCCTGCTGAAGGGCGTCCTGGTGGTGGTCGTCGTGCTCGCGACCTGGGTCGCCTCGCGCCGGGAGGGGACGGCATGA
PROTEIN sequence
Length: 325
VRVALEQRFGPLAEWRSPRGLFTGLAALGLAVLVVLALTTDRFLTVENIKAILSSASIVGIMALGLTFITLIGSLVSLAIAATAVMGAMVFLAELHLGLVPALAISMAAGAAVTALQGLIIGAWGANPVILTIGAGFLLSGITTKASGGVIVQPAGGGYATLNSTPLGVPLGVYVMVVLALILQFVLKRTVLGRRVTLIGENREAARAAGMRIPRITAIAFAIAGASFALGGAFLGAFNKGASAQLEGTATFDVIAAVLVGGTLISGGRGSALRTLAGAIVIATISDLLLLRGFNTGAQILLKGVLVVVVVLATWVASRREGTA*