ggKbase home page

scnpilot_solids2_trim150_scaffold_1080_curated_20

Organism: solids_Actinobacteria_3

near complete RP 48 / 55 MC: 1 BSCG 50 / 51 ASCG 9 / 38
Location: 29300..29905

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, TetR family n=1 Tax=Frankia sp. (strain EAN1pec) RepID=A8L0K6_FRASN similarity UNIREF
DB: UNIREF100
  • Identity: 43.6
  • Coverage: 179.0
  • Bit_score: 136
  • Evalue 2.30e-29
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 43.6
  • Coverage: 179.0
  • Bit_score: 136
  • Evalue 7.20e-30
Transcriptional regulator, TetR family {ECO:0000313|EMBL:ABW14539.1}; TaxID=298653 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EAN1pec).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 43.6
  • Coverage: 179.0
  • Bit_score: 136
  • Evalue 3.20e-29

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Frankia sp. EAN1pec → Frankia → Frankiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 606
GTGGCGGCAGAGGCGAAAACCGTTCCTCGCAAGCGCGTCCCGGCGGCCGAGCGCCGGGACGCGCTGATCGAGGCCGCCATCCACCACTTCGCCCACGGCGGCCTGCAGGGGACCAAGGTGTCCTCGATCGCCGCCGACGTCGGCGTCGCCCAGCCCTACGTCTTCAGCCTCTTCCCGACCAAGCGCGACCTCTTCCTCGCCGCCGTCGACCGGTCCTTCGAGAAGGTGGCGACGCTCTTCGAGCAGGCCGCCGCGGACTTCGACGAGAACGGCCCGCGGGAAGCCGACGAAGACAAGCTGAACGCGATCGGCCACGCCTACATGGACGCGATCGGCGACAACCCCGACCAGCTCCTGCTCCAGCTCCAGGGCTACGCGGCCTGCGGCGACGATCCCGGCATCCAGACCGCCGTGCGACGCAACTACGCGCGCCTGGTCCAGCTCGCCCGCAGGCTCACCGGCGCCGACGACGAGCGCCTCGACGGCTTCTTCCAGATGGGCATGTGGTGCAACGTCGCCGCCGCGCTCGGGATCGAGGATTTCAAGTCCGACTCAGGCTGGGTCGAGAAGTCGCTGGCGGTCGACGACGAGGCCGCGGGCGGATAA
PROTEIN sequence
Length: 202
VAAEAKTVPRKRVPAAERRDALIEAAIHHFAHGGLQGTKVSSIAADVGVAQPYVFSLFPTKRDLFLAAVDRSFEKVATLFEQAAADFDENGPREADEDKLNAIGHAYMDAIGDNPDQLLLQLQGYAACGDDPGIQTAVRRNYARLVQLARRLTGADDERLDGFFQMGMWCNVAAALGIEDFKSDSGWVEKSLAVDDEAAGG*