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scnpilot_solids2_trim150_scaffold_1080_curated_23

Organism: solids_Actinobacteria_3

near complete RP 48 / 55 MC: 1 BSCG 50 / 51 ASCG 9 / 38
Location: comp(31784..32233)

Top 3 Functional Annotations

Value Algorithm Source
vsr; DNA mismatch endonuclease (EC:3.1.-.-); K07458 DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-] similarity KEGG
DB: KEGG
  • Identity: 59.7
  • Coverage: 134.0
  • Bit_score: 168
  • Evalue 2.20e-39
Very short patch repair protein n=1 Tax=Rhodococcus triatomae BKS 15-14 RepID=M2W9W7_9NOCA similarity UNIREF
DB: UNIREF100
  • Identity: 62.5
  • Coverage: 136.0
  • Bit_score: 173
  • Evalue 1.60e-40
Very short patch repair protein {ECO:0000313|EMBL:EME14427.1}; TaxID=1278078 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus triatomae BKS 15-14.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 62.5
  • Coverage: 136.0
  • Bit_score: 173
  • Evalue 2.30e-40

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Taxonomy

Rhodococcus triatomae → Rhodococcus → Corynebacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 450
GTGAAGGCCGCCCGCAAAGCCCGACCGCCGATGACGCCCTCCTCCGCCGGCGTCAGCGAACGGATGTCACGGGTGCGGCGGCGCGACACGGCGCCGGAGCTGGAACTGCGCTCCGAGCTCCACCGGCGCGGCTTCCGCTACCGGGTCGACCGCCGGCCGCTGAAAGGCGTGCCGAGCCGCGCCGACCTCGTCTTCGGCCCGGCCAAGGTCGCCGTCTACGTCGACGGCTGCTTCTGGCACTCCTGCCCCGAGCACGGCACCCTGCCCCGCTCAAACGAAGCCTTCTGGCAGGACAAGCTCACCCGCAACCGCGAGCGTGACGCCACCGTGAACGGGCTCCTCGCCGCGGCGGGCTGGACCGTGGTCCGGGTCTGGGAGCACGAGGAGATCGAGGCGGCCGCCGACCGGGTCGAGTCCGCCGTGCGCGAGTCCCTAAGCCGCCACCGCTGA
PROTEIN sequence
Length: 150
VKAARKARPPMTPSSAGVSERMSRVRRRDTAPELELRSELHRRGFRYRVDRRPLKGVPSRADLVFGPAKVAVYVDGCFWHSCPEHGTLPRSNEAFWQDKLTRNRERDATVNGLLAAAGWTVVRVWEHEEIEAAADRVESAVRESLSRHR*