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scnpilot_solids2_trim150_scaffold_840_curated_24

Organism: solids_Alphaproteobacteria_1

near complete RP 50 / 55 BSCG 49 / 51 MC: 3 ASCG 11 / 38
Location: comp(26543..27748)

Top 3 Functional Annotations

Value Algorithm Source
L-carnitine dehydratase/bile acid-inducible protein F n=1 Tax=Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009) RepID=Q6N9H0_RHOPA similarity UNIREF
DB: UNIREF100
  • Identity: 48.1
  • Coverage: 401.0
  • Bit_score: 386
  • Evalue 3.30e-104
L-carnitine dehydratase/bile acid-inducible protein F similarity KEGG
DB: KEGG
  • Identity: 48.1
  • Coverage: 401.0
  • Bit_score: 386
  • Evalue 1.00e-104
L-carnitine dehydratase/bile acid-inducible protein F {ECO:0000313|EMBL:ACF00295.1}; TaxID=395960 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain TIE-1).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 48.1
  • Coverage: 401.0
  • Bit_score: 386
  • Evalue 4.60e-104

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Taxonomy

Rhodopseudomonas palustris → Rhodopseudomonas → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1206
ATGGACGGATTGTTCGCAGATCTTCTCGTCATCGATTGCGCCAGCTTCATTGCCGGCCCCGCGGCGGCCACCATGCTGGCCGATTTCGGCGCCCGCGTGATAAAGATCGAACCGCCGGTCACGGGCGACAGTTACCGCCAGCTCAAACACCTGCCCAGCATGCCGCCATCGCAGCACGATTATTCCTGGCTGCTCGACAACCGGAACAAGGAAAGTCTGGCGCTGGATCTGAAACAGGCGCCCGCCCGCGCGATCCTTGAAACGCTTCTGAAAAGGTGCGATGTCTTTATCACCAATTATCCCGGCCCGGTGCGGGAAAAGCTGCGCTTGCGCGCCGATGATCTTCTGCCGCTCAATCCGCGGCTGATCTATGCCTCCATCACCCCTTATGGCGAGTCGGGGCCGGAGAAGGATCGCACCGGTTACGATGCCACGGCGTGGTGGGCGCGCTCCGGCCTGATGGATCATGTCCGCGCCTCCCCCGATGCGGCGCCGGGCCTTTCGGTGCCGGGCATGGGCGATCACCCGACCGCCGCCACCTTGTTTGCAGGCATTGCCGCCGCGCTTTACCGGCGGGAAAAAACGGGCAAGGGCGGTCACGTTTCCACATCGCTGCTCGCCAACGGGTTGTGGTCCAATGCCGTGCTGGTACAGGCCGCGCTTTGCGGCGCCGATCTTGGCATCCGCCGCGGCCGTGGCGAAAGAAGCGCGCTGACAGAGCTTTATTGTTGCAAGGACGGGCGCTGGTTCATGCTTGTCATCATCAACGATACGCGCGATTGGCCGCGCCTGCTCGAATGTCTCGGCAAAGGCGAATGGGCGTCCGATCCCCGCTTTGCAACGGCGGATGCGCGCAAGGCCAATGCCGCCCAATTGGTCGCCCTGCTGGAGCAGGTTTTCGCGGGCGATGACTGGGCCCATTGGCAGGCCTGTTTCGAAGCCGCCGCCATCCCCGTCGGCGCGATTTCGCGCACTGCCGACCACATCGTGGATGGGCAGATTGCCGCCAATGATTTCTTTCGCGATATTGCGGGTGTTGCCGGGGTGAAAACCATCGACAATCCGGTGCAGATTGCGGGCTGCGCAAAAGTGCCGCCGCGCAAGGCGCCGGACATCGGTCAGCATACAGGCGCGATCCTGCGGGAGTTGGGGTTGGCGCAAGCCGAGATTGCGGCGCTGGCCGAATGCGGTGCCGCCGGTCTTTGA
PROTEIN sequence
Length: 402
MDGLFADLLVIDCASFIAGPAAATMLADFGARVIKIEPPVTGDSYRQLKHLPSMPPSQHDYSWLLDNRNKESLALDLKQAPARAILETLLKRCDVFITNYPGPVREKLRLRADDLLPLNPRLIYASITPYGESGPEKDRTGYDATAWWARSGLMDHVRASPDAAPGLSVPGMGDHPTAATLFAGIAAALYRREKTGKGGHVSTSLLANGLWSNAVLVQAALCGADLGIRRGRGERSALTELYCCKDGRWFMLVIINDTRDWPRLLECLGKGEWASDPRFATADARKANAAQLVALLEQVFAGDDWAHWQACFEAAAIPVGAISRTADHIVDGQIAANDFFRDIAGVAGVKTIDNPVQIAGCAKVPPRKAPDIGQHTGAILRELGLAQAEIAALAECGAAGL*