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scnpilot_solids2_trim150_scaffold_521_curated_10

Organism: solids_Alphaproteobacteria_1

near complete RP 50 / 55 BSCG 49 / 51 MC: 3 ASCG 11 / 38
Location: comp(9729..10277)

Top 3 Functional Annotations

Value Algorithm Source
RNA 2',3'-cyclic phosphodiesterase {ECO:0000256|HAMAP-Rule:MF_01940}; Short=RNA 2',3'-CPDase {ECO:0000256|HAMAP-Rule:MF_01940};; EC=3.1.4.- {ECO:0000256|HAMAP-Rule:MF_01940};; TaxID=399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Neorhizobium.;" source="Rhizobium galegae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 54.5
  • Coverage: 178.0
  • Bit_score: 195
  • Evalue 5.30e-47
2'-5' RNA ligase; K01975 2'-5' RNA ligase [EC:6.5.1.-] similarity KEGG
DB: KEGG
  • Identity: 51.4
  • Coverage: 181.0
  • Bit_score: 190
  • Evalue 5.00e-46
2''-5'' RNA ligase n=1 Tax=Rhizobium sp. CF080 RepID=J2RU63_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 53.9
  • Coverage: 178.0
  • Bit_score: 195
  • Evalue 4.90e-47

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Taxonomy

Neorhizobium galegae → Neorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 549
ATGATCCGTTTGTTCACCGCGCTTGAGCTTCCCGATTCCGTGGCACAGGGCCTTTCGCTGATTCAGGCCGGTGTTCCCGGCGCGCGCTGGCAATCGCGGGAGCAATTGCACCTGACCTTGCGCTTTATCGGTGAGGTGGATGGGCGCGATGCCAACGCGATTGACGATGCGCTGTCGGGAATCGATGCGCCCGGTTTTATGTTGACGCTCAAAGGTGTGGGCGAGTTCGGCGGGAAAAATCCTCGCGCCTTATGGGCGGGCGTGGAGCCTTCACCTGCGCTCACCCATCTGCAGCGCAAGATCGAAAGCGCCTTGCAGCGCGCTGGCCTCCCGCCGGAGCCGCGGAAATACACCCCGCATGTCACACTGGCCCGTTTGCGTAATACGCCGCCGGGCGCGGTGATGGACTATCTGACCGATCACGGCCTTTATGCCAGCGCGCCGTTCACGGCTGAAAACTTCACGTTGTTTTCCAGCGTTCTGTCGCAGAACGGCAGCATCTACCGGCAGGAACAGGTCTACCCCTTGCGTGAGGACAATGGCGCCTAG
PROTEIN sequence
Length: 183
MIRLFTALELPDSVAQGLSLIQAGVPGARWQSREQLHLTLRFIGEVDGRDANAIDDALSGIDAPGFMLTLKGVGEFGGKNPRALWAGVEPSPALTHLQRKIESALQRAGLPPEPRKYTPHVTLARLRNTPPGAVMDYLTDHGLYASAPFTAENFTLFSSVLSQNGSIYRQEQVYPLREDNGA*