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scnpilot_solids2_trim150_scaffold_380_curated_1

Organism: solids_Alphaproteobacteria_1

near complete RP 50 / 55 BSCG 49 / 51 MC: 3 ASCG 11 / 38
Location: comp(3..392)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulatory protein n=1 Tax=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) RepID=Q89B92_BRADU similarity UNIREF
DB: UNIREF100
  • Identity: 52.3
  • Coverage: 130.0
  • Bit_score: 144
  • Evalue 5.40e-32
transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 52.3
  • Coverage: 130.0
  • Bit_score: 144
  • Evalue 1.70e-32
HTH-type transcriptional regulator ttuA {ECO:0000313|EMBL:AHY56321.1}; TaxID=476282 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonicum SEMIA 5079.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 52.3
  • Coverage: 130.0
  • Bit_score: 144
  • Evalue 7.60e-32

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Taxonomy

Bradyrhizobium japonicum → Bradyrhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 390
ATGATCGACGGTGGGCATGACAGGTTGATGTGTGACCTGATAACCAACGCGATCGACATCGCCATCATGACCACGTGTGGCCCAAGCTGGGACGATCGGCGCCTGCCGCTCTGGAGCGAGCGCGTTATCGTTGCTTTGCCGGCGCAGCATCCATTCTGCGCTCGTAGCATGATCAACTGGTCTGATTTTGCAAATGAGCGAATGCTATTCCCTCAACGGGGTCCAGGCCCCGAACTCGAACGATTGTTGACCGCAAAACTCCATGGCTCGGGCCCACAGCGGATACTACATCACGACGTTAGTCTCGATCGCCTGCTGAGTCTGGTTGGCGCCGAATATGGTATGTTGCTGATGCTTGAAGGAGCGACAGGCGTCCATTACGAGGGTGTA
PROTEIN sequence
Length: 130
MIDGGHDRLMCDLITNAIDIAIMTTCGPSWDDRRLPLWSERVIVALPAQHPFCARSMINWSDFANERMLFPQRGPGPELERLLTAKLHGSGPQRILHHDVSLDRLLSLVGAEYGMLLMLEGATGVHYEGV