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scnpilot_solids2_trim150_scaffold_380_curated_29

Organism: solids_Alphaproteobacteria_1

near complete RP 50 / 55 BSCG 49 / 51 MC: 3 ASCG 11 / 38
Location: 26955..27290

Top 3 Functional Annotations

Value Algorithm Source
UPI0003D634E0 related cluster n=1 Tax=unknown RepID=UPI0003D634E0 similarity UNIREF
DB: UNIREF100
  • Identity: 73.9
  • Coverage: 111.0
  • Bit_score: 163
  • Evalue 9.70e-38
Conjugal transfer protein TrbK {ECO:0000313|EMBL:ETI59547.1}; TaxID=1207055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. C100.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 73.9
  • Coverage: 111.0
  • Bit_score: 163
  • Evalue 1.40e-37
trbK; conjugal transfer protein TrbK similarity KEGG
DB: KEGG
  • Identity: 68.5
  • Coverage: 111.0
  • Bit_score: 153
  • Evalue 3.20e-35

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Taxonomy

Sphingobium sp. C100 → Sphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 336
ATGGACGGCAAGATGCTCGCACTCCTGGCCGCCGTCGTCTTCGTCGCGCTCGCCATCACCGCGACGGCGATCGAGATGAGCCGCAAGGAGGAGCCGGTCGAACCCTGGGCCTCCAGCCGGCCCGCAGCCTCGAACGCCGATCCGCTTCGCGACGAGCTGCTGCGATGCCAGGCGCTCGGCGAAGCGGGTCCGCGCGATCCGTCCTGCCTCCGCGCCTGGGCGGAAAACCGCCAGCGCTTCCTCGCGCCCGGCTCGCGTGCGGCCGAACGCCTGCCGCAACCGCCTGCCGCACCGCAGACCCAAGCGATCCCGGCGCAACCGGCCGAGGCGCAATAG
PROTEIN sequence
Length: 112
MDGKMLALLAAVVFVALAITATAIEMSRKEEPVEPWASSRPAASNADPLRDELLRCQALGEAGPRDPSCLRAWAENRQRFLAPGSRAAERLPQPPAAPQTQAIPAQPAEAQ*