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scnpilot_solids2_trim150_scaffold_290_curated_21

Organism: solids_Alphaproteobacteria_1

near complete RP 50 / 55 BSCG 49 / 51 MC: 3 ASCG 11 / 38
Location: comp(21675..22145)

Top 3 Functional Annotations

Value Algorithm Source
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; TaxID=1220582 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Rhizobium rubi NBRC 13261.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 61.4
  • Coverage: 153.0
  • Bit_score: 202
  • Evalue 4.80e-49
def; peptide deformylase Def (EC:3.5.1.88) similarity KEGG
DB: KEGG
  • Identity: 61.9
  • Coverage: 155.0
  • Bit_score: 200
  • Evalue 4.10e-49
Peptide deformylase n=1 Tax=Rhizobium sp. RepID=L0NBS5_RHISP similarity UNIREF
DB: UNIREF100
  • Identity: 60.8
  • Coverage: 153.0
  • Bit_score: 200
  • Evalue 1.00e-48

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Taxonomy

Agrobacterium rubi → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 471
GTGTCCGAAGCGGTGGACCGGGTGGACGATTCCATCCGCAAGCTGGCCGACGACATGGTGGACAGCATGTATGCCGCCGATGGCATCGGCCTGGCCGCGATCCAGATCGGCGTGCCCAAACGCATGCTGGTGATGGATCTGGATCAGAAGGATGGTGGCCGCAATCCGCGCCTGTTCATCAATCCCAAGGTCGTCTGGGCCTCGGAAGAGATGGCGAAGATGGAAGAGGGTTGCCTCTCCGTCCCCGAAGTGTGGGAGGACGTGGAACGCCCCGCCCGCATCACCGCCGAATATCTCGATCGCGACGGCGCGCTCCAGACGCTGGAGGCCGATGGCCTTCTCGCCACCTGCCTGCAGCATGAGATCGATCATCTGAACGGCGTGCTGTTCATCGACCATATCTCCCGGCTGAAGCGCGGCATCGCGATGCGCAAGCTGACAAAGGCGAAAAAACTGAAAGACGCGGGATGA
PROTEIN sequence
Length: 157
VSEAVDRVDDSIRKLADDMVDSMYAADGIGLAAIQIGVPKRMLVMDLDQKDGGRNPRLFINPKVVWASEEMAKMEEGCLSVPEVWEDVERPARITAEYLDRDGALQTLEADGLLATCLQHEIDHLNGVLFIDHISRLKRGIAMRKLTKAKKLKDAG*