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scnpilot_solids2_trim150_scaffold_132_curated

Search features with annotation key words

Displaying items 91-119 of 119 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_132_curated_91
Haliscomenobacter hydrossis, Haliscomenobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(113929..114300)
DNA (372bp) protein (124aa)
Uncharacterized protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NRP9_9SPHI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEE52710.1}; TaxID=760192 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Haliscomenobacter.;" source="Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767; / O).;"
scnpilot_solids2_trim150_scaffold_132_curated_92
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(114353..115048)
DNA (696bp) protein (232aa)
cytochrome c oxidase subunit III; K02276 cytochrome c oxidase subunit III [EC:1.9.3.1]
Cytochrome c oxidase subunit III n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TF82_NIAKG
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
scnpilot_solids2_trim150_scaffold_132_curated_93
Saprospira grandis, Saprospira, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(115088..115714)
DNA (627bp) protein (209aa)
cytochrome C oxidase subunit III; K02276 cytochrome c oxidase subunit III [EC:1.9.3.1]
Heme/copper-type cytochrome/quinol oxidase, subunit 3 n=1 Tax=Saprospira grandis DSM 2844 RepID=J1I4N7_9SPHI
Heme/copper-type cytochrome/quinol oxidase, subunit 3 {ECO:0000313|EMBL:EJF53685.1}; Flags: Precursor;; TaxID=694433 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Saprospira.;" source="Saprospira grandis DSM 2844.;"
scnpilot_solids2_trim150_scaffold_132_curated_94
Pontibacter korlensis, Pontibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(115723..116625)
DNA (903bp) protein (301aa)
Protoheme IX farnesyltransferase {ECO:0000256|HAMAP-Rule:MF_00154}; EC=2.5.1.- {ECO:0000256|HAMAP-Rule:MF_00154};; Heme B farnesyltransferase {ECO:0000256|HAMAP-Rule:MF_00154}; Heme O synthase {ECO:0000256|HAMAP-Rule:MF_00154}; TaxID=400092 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Pontibacter.;" source="Pontibacter korlensis.;"
protoheme IX farnesyltransferase; K02301 protoheme IX farnesyltransferase [EC:2.5.1.-]
protoheme IX farnesyltransferase n=1 Tax=Pontibacter roseus RepID=UPI0003823E32
scnpilot_solids2_trim150_scaffold_132_curated_95
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(116665..118479)
DNA (1815bp) protein (605aa)
cytochrome C oxidase; K02274 cytochrome c oxidase subunit I [EC:1.9.3.1]
Cytochrome-c oxidase {ECO:0000313|EMBL:ACU58020.1}; EC=1.9.3.1 {ECO:0000313|EMBL:ACU58020.1};; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
Cytochrome-c oxidase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PG37_CHIPD
scnpilot_solids2_trim150_scaffold_132_curated_96
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(118527..119612)
DNA (1086bp) protein (362aa)
hypothetical protein n=1 Tax=Flexithrix dorotheae RepID=UPI000372B237
heme/copper-type cytochrome/quinol oxidase subunit 2
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
scnpilot_solids2_trim150_scaffold_132_curated_97
Saprospira grandis, Saprospira, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(119677..121074)
DNA (1398bp) protein (466aa)
hypothetical protein n=1 Tax=Lewinella persica RepID=UPI00037E2B0B
Uncharacterized protein {ECO:0000313|EMBL:EJF53681.1}; TaxID=694433 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Saprospira.;" source="Saprospira grandis DSM 2844.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_132_curated_98
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(121106..121822)
DNA (717bp) protein (239aa)
Quinol:cytochrome c oxidoreductase monoheme cytochrome subunit n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TF76_NIAKG
quinol:cytochrome c oxidoreductase monoheme cytochrome subunit
Quinol:cytochrome c oxidoreductase monoheme cytochrome subunit {ECO:0000313|EMBL:AEW02696.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids2_trim150_scaffold_132_curated_99
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(121855..122394)
DNA (540bp) protein (180aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003736940
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU58024.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
scnpilot_solids2_trim150_scaffold_132_curated_100
Phaeodactylibacter xiamenensis, Phaeodactylibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(122437..123891)
DNA (1455bp) protein (485aa)
polysulfide reductase NrfD; K00185 molybdopterin oxidoreductase, membrane subunit [EC:1.2.7.-]
Fe-S-cluster-containing hydrogenase n=1 Tax=Lewinella cohaerens RepID=UPI0003810022
Hydrogenase {ECO:0000313|EMBL:KGE89779.1}; TaxID=1524460 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Phaeodactylibacter.;" source="Phaeodactylibacter xiamenensis.;"
scnpilot_solids2_trim150_scaffold_132_curated_101
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(123920..126976)
DNA (3057bp) protein (1019aa)
iron-sulfur binding oxidoreductase; K00184 molybdopterin oxidoreductase, iron-sulfur binding subunit [EC:1.2.7.-]
Putative iron-sulfur binding oxidoreductase id=4480790 bin=GWF2_Bacteroidetes_42_66 species=Spirosoma linguale genus=Spirosoma taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_42_66 organism_group=Bacteroidetes organism_desc=a73
Tax=GWE2_Bacteroidetes_42_39_curated
scnpilot_solids2_trim150_scaffold_132_curated_102
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(127047..128345)
DNA (1299bp) protein (433aa)
Cytochrome c class I n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PG44_CHIPD
Putative cytochrome c {ECO:0000313|EMBL:GAO42193.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
cytochrome C class I
scnpilot_solids2_trim150_scaffold_132_curated_103
Solitalea canadensis, Solitalea, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

128694..129209
DNA (516bp) protein (172aa)
N5-carboxyaminoimidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338}; Short=N5-CAIR mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};; EC=5.4.99.18 {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};; 5-(carboxyamino)imidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929}; TaxID=929556 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Solitalea.;" source="Solitalea canadensis
N5-carboxyaminoimidazole ribonucleotide mutase n=1 Tax=Pontibacter roseus RepID=UPI00035F857C
phosphoribosylaminoimidazole carboxylase catalytic subunit PurE
scnpilot_solids2_trim150_scaffold_132_curated_104
Leptospira weilii, Leptospira, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

129202..130539
DNA (1338bp) protein (446aa)
phosphodiesterase I; K01113 alkaline phosphatase D [EC:3.1.3.1]
PhoD-like phosphatase n=1 Tax=Leptospira weilii serovar Ranarum str. ICFT RepID=N1WJ72_9LEPT
PhoD-like phosphatase {ECO:0000313|EMBL:EMY77397.1}; TaxID=1218598 species="Bacteria; Spirochaetes; Leptospirales; Leptospiraceae; Leptospira.;" source="Leptospira weilii serovar Ranarum str. ICFT.;"
scnpilot_solids2_trim150_scaffold_132_curated_105
Aquimarina atlantica, Aquimarina, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

130539..131414
DNA (876bp) protein (292aa)
lipid A biosynthesis acyltransferase; K02517 lipid A biosynthesis lauroyl acyltransferase [EC:2.3.1.-]
Putative lipd A biosynthesis related exported protein n=1 Tax=Leeuwenhoekiella blandensis (strain CECT 7118 / CCUG 51940 / MED217) RepID=A3XNF0_LEEBM
Lipid A biosynthesis acyltransferase {ECO:0000313|EMBL:EZH71518.1}; TaxID=1317122 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Aquimarina.;" source="Aquimarina atlantica.;"
scnpilot_solids2_trim150_scaffold_132_curated_106
Bacteroides sp. CAG:530, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(131600..132142)
DNA (543bp) protein (181aa)
Shikimate kinase {ECO:0000256|HAMAP-Rule:MF_00109}; Short=SK {ECO:0000256|HAMAP-Rule:MF_00109};; EC=2.7.1.71 {ECO:0000256|HAMAP-Rule:MF_00109};; TaxID=1262741 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:530.;"
shikimate kinase; K00891 shikimate kinase [EC:2.7.1.71]
Shikimate kinase n=1 Tax=Bacteroides sp. CAG:530 RepID=R6DHD7_9BACE
scnpilot_solids2_trim150_scaffold_132_curated_107
marine gamma proteobacterium HTCC2148, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

132371..133537
DNA (1167bp) protein (389aa)
Putative uncharacterized protein n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7RX95_9GAMM
Putative uncharacterized protein {ECO:0000313|EMBL:EEB78754.1}; TaxID=247634 species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; OM60 clade.;" source="marine gamma proteobacterium HTCC2148.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_132_curated_108
Chryseobacterium sp. P1-3, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

133570..133722
DNA (153bp) protein (51aa)
Uncharacterized protein n=1 Tax=Elizabethkingia meningoseptica ATCC 13253 = NBRC 12535 RepID=R9CHH3_ELIME
Uncharacterized protein {ECO:0000313|EMBL:KFF75620.1}; TaxID=1517683 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium sp. P1-3.;"
scnpilot_solids2_trim150_scaffold_132_curated_109
CG_Delta_02, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(133695..134084)
DNA (390bp) protein (130aa)
Putative uncharacterized protein id=4508873 bin=GWF2_Bacteroidetes_49_14 species=Flavobacterium frigoris genus=Flavobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_49_14 organism_group=Bacteroidetes organism_desc=Good (not ab)
hypothetical protein
Tax=CG_Delta_02
scnpilot_solids2_trim150_scaffold_132_curated_110
GWE2_Bacteroidetes_39_28_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

134185..134694
DNA (510bp) protein (170aa)
nuclease; K01174 micrococcal nuclease [EC:3.1.31.1]
hypothetical protein n=1 Tax=Pedobacter arcticus RepID=UPI00036EA614
Tax=GWE2_Bacteroidetes_39_28_curated
scnpilot_solids2_trim150_scaffold_132_curated_111
unknown

Not on your lists

comp(134770..134967)
DNA (198bp) protein (66aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_132_curated_112
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

135066..135341
DNA (276bp) protein (92aa)
ATP-dependent Clp protease adaptor protein ClpS n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PM80_CHIPD
ATP-dependent Clp protease adaptor protein ClpS; K06891 ATP-dependent Clp protease adaptor protein ClpS
ATP-dependent Clp protease adaptor protein ClpS {ECO:0000313|EMBL:ACU63985.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
scnpilot_solids2_trim150_scaffold_132_curated_113
Verrucomicrobiae bacterium DG1235, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

135372..136319
DNA (948bp) protein (316aa)
Ser/Thr protein phosphatase family protein n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JMC7_9BACT
Ser/Thr protein phosphatase family protein {ECO:0000313|EMBL:EDY83798.1}; TaxID=382464 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales.;" source="Verrucomicrobiae bacterium DG1235.;"
metallophosphoesterase
scnpilot_solids2_trim150_scaffold_132_curated_114
Flammeovirgaceae bacterium 311, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

136316..136636
DNA (321bp) protein (107aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI0003624C90
Uncharacterized protein {ECO:0000313|EMBL:AHM58981.1}; TaxID=1257021 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; unclassified Flammeovirgaceae.;" source="Flammeovirgaceae bacterium 311.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_132_curated_115
Haliscomenobacter hydrossis, Haliscomenobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

136730..138202
DNA (1473bp) protein (491aa)
Sodium/hydrogen exchanger n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4L178_HALH1
sodium/hydrogen exchanger; K11105 cell volume regulation protein A
Sodium/hydrogen exchanger {ECO:0000313|EMBL:AEE52810.1}; TaxID=760192 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Haliscomenobacter.;" source="Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767; / O).;"
scnpilot_solids2_trim150_scaffold_132_curated_116
Chryseobacterium antarcticum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

138209..139027
DNA (819bp) protein (273aa)
Uncharacterized protein n=4 Tax=Riemerella anatipestifer RepID=E4T947_RIEAD
Uncharacterized protein {ECO:0000313|EMBL:KEY19019.1}; TaxID=266748 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium antarcticum.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_132_curated_117
unknown

Not on your lists

139121..139912
DNA (792bp) protein (264aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_132_curated_118
GWA2_Bacteroidetes_31_9_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

139942..143505
DNA (3564bp) protein (1188aa)
Uncharacterized protein n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KUZ8_SOLCM
hypothetical protein
Tax=GWA2_Bacteroidetes_31_9_curated
scnpilot_solids2_trim150_scaffold_132_curated_119
Solitalea canadensis, Solitalea, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

143508..143879
DNA (372bp) protein (124aa)
Uncharacterized small membrane protein n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KRN6_SOLCM
hypothetical protein
Uncharacterized small membrane protein {ECO:0000313|EMBL:AFD07617.1}; Flags: Precursor;; TaxID=929556 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Solitalea.;" source="Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 /; NCIMB 12057 / USAM 9D) (Flexibacter canadensis).;"
Displaying items 91-119 of 119 in total

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